LOCUS HUMBCAA 4167 bp mRNA linear HUM 04-MAR-1997
DEFINITION Human (clone 8B1) Br-cadherin mRNA, complete cds.
ACCESSION L33477
VERSION L33477.1
KEYWORDS Br-cadherin.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4167)
AUTHORS Selig,S., Bruno,S., Scharf,J.M., Wang,C.H., Vitale,E., Gilliam,T.C.
and Kunkel,L.M.
TITLE Expressed cadherin pseudogenes are localized to the critical region
of the spinal muscular atrophy gene
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 92 (9), 3702-3706 (1995)
PUBMED 7731968
FEATURES Location/Qualifiers
source 1..4167
/db_xref="H-InvDB:HIT000193096"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/clone="8B1"
/tissue_type="cerebral cortex"
/dev_stage="adult"
5'UTR 1..1088
exon 1..567
/number=1
exon 568..661
/number=2
exon 662..756
/number=3
exon 757..902
/number=4
exon 903..1319
/number=5
CDS 1089..3473
/codon_start=1
/product="Br-cadherin"
/protein_id="AAB48539.1"
/translation="MLTRNCLSLLLWVLFDGGLLTPLQPQPQQTLATEPRENVIHLPG
QRSHFQRVKRGWVWNQFFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVF
TIDETTGDIHAIRSLDREEKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKF
LDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVI
RTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHL
KVPESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKK
PLDFETKKAYTFKVDASNLHLDHRFHSAGPFKDTATVKISVLDVDEPPVFSKPLYTME
VYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNEGTIATNELLDRE
STAQYNFSIIASKVSNPLLTSKVNILINVLDVNEFPPEISVPYETAVCENAKPGQIIQ
IVSAADRDLSPAGQQFSFRLSPEAAIKPNFTVRDFRNNTAGIETRRNGYSRRQQELYF
LPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILSCNVEAIFLPVGLSTGALIAILLCI
VILLAIVVLYVALRRQKKKDTLMTSKEDIRDNVIHYDDEGGGEEDTQAFDIGALRNPK
VIEENKIRRDIKPDSLCLPRQRPPMEDNTDIRDFIHQRLQENDVDPTAPPYDSLATYA
YEGSGSVAESLSSIDSLTTETDQDYDYLTDWGPRFKVLADMFGEEESYNPDKVT"
sig_peptide 1089..1157
mat_peptide 1158..3470
/product="Br-cadherin"
exon 1320..1614
/number=6
exon 1615..1734
/number=7
exon 1735..1902
/number=8
exon 1903..2090
/number=9
exon 2091..2344
/number=10
exon 2345..2481
/number=11
exon 2482..2603
/number=12
exon 2604..2721
/number=13
exon 2722..2973
/number=14
exon 2974..4167
/number=15
3'UTR 3474..4167
regulatory 4130..4135
/regulatory_class="polyA_signal_sequence"
polyA_site 4167
BASE COUNT 1266 a 906 c 924 g 1071 t
ORIGIN
1 cccgcctaat cttcacccgc tgctaggctc gtttaatgag tcttctgaga gctaaggagt
61 cctcggattc attcaaagca ttctacaatg aacgctaggg gggaaaaaga acaaacaaaa
121 tacatttcaa atataggatt caattacttt tcactactca atgatgtgtc aaaggcacgc
181 tgtgttttgt tttgagggcg gggagatgac aggagggaat cctgggcccc cattggctcg
241 ccgctcgccg ctgcagttga gctccagccg ctccgagagc attattgatc tgaagggtaa
301 atgtggaggg agccacagag aggggtccag gcttttctga gaagagaggc agcctcttcc
361 aggaagaaag tggtgtctac tggctgcccg gcctggagaa ccttctttga atgaaaacgg
421 acaaaatgca aagcagtgcg ttggcacagt gatttggaaa ggggaaacag aagagaaggg
481 tctcaccttc cgcgcaaggc tgagctgttg gcaccctgct gcggccgtcg gtgctgctgc
541 tcctgcagct gccttttctg ccatcagctt tgttacctaa cagcttggct cttttgggaa
601 tatagacaag ctggaaccca ggagcagttg ggagttttaa agaatgccag cctttttaaa
661 gctttgatgt ccagtgctat agaatcaagt tactgtggag gtcaaaacaa tttgagatac
721 ataagctggc cttagaaaat aaattgcctc taacttacag tgaggagctc aacataacag
781 ggaaaaggag cacaggatgc agctacttgg agggtgttga ttgaaaactt cgatctcccc
841 accccattca cggttgattt gacggatttc tcaccttgtt cacagagaaa atttcaatta
901 aggccccttt agatggaata taatacagca gaagcctttt catcaaaagg attaatgcct
961 gcatcatcat ttctgcaata aaacaagaag ctaagtggtg gaggccacag acacctcaaa
1021 cctggattcc acaattctac gttaagtgtt ggagttttta ttactctgct gtaggaaagc
1081 ctttgccaat gcttacaagg aactgtttat ccctgcttct ctgggttctg tttgatggag
1141 gtctcctaac accactacaa ccacagccac agcagacttt agccacagag ccaagagaaa
1201 atgttatcca tctgccagga caacggtcac atttccaacg tgttaaacgt ggctgggtat
1261 ggaatcaatt ttttgtgctg gaagaataca tgggctccga gcctcagtat gtgggaaagc
1321 tccattccga cttagacaag ggagagggca ctgtgaaata caccctctca ggagatggcg
1381 ctggcaccgt ttttaccatt gatgaaacca caggggacat tcatgcaata aggagcctag
1441 atagagaaga gaaacctttc tacactcttc gtgctcaggc tgtggacata gaaaccagaa
1501 agcccctgga gcctgaatca gaattcatca tcaaagtgca ggatattaat gataatgagc
1561 caaagttttt ggatggacct tatgttgcta ctgttccaga aatgtctcct gtgggtgcat
1621 atgtactcca ggtcaaggcc acagatgcag atgacccgac ctatggaaac agtgccagag
1681 tcgtttacag cattcttcag ggacaacctt atttctctat tgatcccaag acaggtgtta
1741 ttagaacagc tttgccaaac atggacagag aagtcaaaga acaatatcaa gtactcatcc
1801 aagccaagga tatgggagga cagcttggag gattagccgg aacaacaata gtcaacatca
1861 ctctcaccga tgtcaatgac aatccacctc gattccccaa aagcatcttc cacttgaaag
1921 ttcctgagtc ttcccctatt ggttcagcta ttggaagaat aagagctgtg gatcctgatt
1981 ttggacaaaa tgcagaaatt gaatacaata ttgttccagg agatggggga aatttgtttg
2041 acatcgtcac agatgaggat acacaagagg gagtcatcaa attgaaaaag cctttagatt
2101 ttgaaacaaa gaaggcatac actttcaaag ttgatgcttc caaccttcac cttgaccacc
2161 ggtttcactc ggcgggccct ttcaaagaca cagctacggt gaagatcagc gtgctggacg
2221 tagatgagcc accggttttc agcaagccgc tctacaccat ggaggtttat gaagacactc
2281 cggtagggac catcattggc gctgtcactg ctcaagacct ggatgtaggc agcagtgctg
2341 ttaggtactt catagattgg aagagtgatg gggacagcta ctttacaata gatggaaatg
2401 aaggaaccat cgccactaat gaattactag acagagaaag cactgcgcag tataatttct
2461 ccataattgc gagtaaagtt agtaaccctt tattgaccag caaagtcaat atactgatta
2521 atgtcttaga tgtaaatgaa tttcctccag aaatatctgt gccatatgag acagccgtgt
2581 gtgaaaatgc caagccagga cagataattc agatagtcag tgctgcagac cgagatcttt
2641 cacctgctgg gcaacaattc tcctttagat tatcacctga ggctgctatc aaaccaaatt
2701 ttacagttcg tgacttcaga aacaacacag cggggattga aacccgaaga aatggataca
2761 gccgcaggca gcaagagttg tatttcctcc ctgttgtaat agaagacagc agctaccctg
2821 tccagagcag cacaaacaca atgactattc gagtctgtag atgtgactct gatggcacca
2881 tcctgtcttg taatgtggaa gcaatttttc tacctgtagg acttagcact ggggcgttga
2941 ttgcaattct actatgcatt gttatactct tagccatagt tgtactgtat gtagcactgc
3001 gaaggcagaa gaaaaaagac accctgatga cctctaaaga agacatcaga gacaacgtca
3061 tccattacga tgatgaagga ggtggggagg aagataccca ggctttcgac atcggggctc
3121 tgagaaaccc aaaagtgatt gaggagaaca aaattcgcag ggatataaaa ccagactctc
3181 tctgtttacc tcgtcagaga ccacccatgg aagataacac agacataagg gatttcattc
3241 atcaaaggct acaggaaaat gatgtggatc caactgcccc accatacgat tcactggcca
3301 catatgccta cgaagggagt gggtccgtgg cagagtccct cagctctata gactctctca
3361 ccacagaaac cgaccaggac tatgactatc tgacagactg gggaccccgc tttaaagtct
3421 tggcagacat gtttggcgaa gaagagagtt ataaccctga taaagtcact taagggagtc
3481 gtggaggcta aaatacaacc gagaggggag atttttaaaa aagaaaaaga aacacaaata
3541 ttaatagaaa tctctctcac acacacacac acacacaaac acacacacac acacacactc
3601 tttctgggac aagattcctt tgattacctg gtttctagta agttactaaa ttaatcatat
3661 tgtcagtttt ggtttattct gccaacacga gatacatcct ataatgtgta cttgctttgt
3721 tttgttgttt tgttttttca caatcacact gagacaagct caggcctatt caatacaatt
3781 tactgacatg acaacctaga acgaagatag ctatgtggca tcacggtgga agagtgttag
3841 atttttctta attccactaa agtgcctatt gaaactctta tcatttaaag tggtgtacag
3901 tacactctgc tgtgatggta ttgcgggatt cagagataaa gacataaaac aaagacaccg
3961 tctttatgtc aagaagcaat agcgacactc tgactctcct cattcctttt gagaacaaaa
4021 gaagaacact ttctgatctc caccttcttc taattcaaaa ggttttcttt ttctttttta
4081 aactgtatgc taaaacgtat ttgtttatcc tatcctttca gaaaattgaa ataaatatga
4141 aaatatcaag ttcaatatgt aagtccc
//