LOCUS AH003216 6670 bp DNA linear HUM 01-AUG-2016
DEFINITION Homo sapiens DNA-binding protein A gene, complete cds.
ACCESSION AH003216 L29064 L29065 L29066 L29067 L29068 L29069 L29070 L29071
L29072 L29073
VERSION AH003216.2
KEYWORDS DNA-binding protein A.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6670)
AUTHORS Kudo,S., Mattei,M.G. and Fukuda,M.
TITLE Characterization of the gene for dbpA, a family member of the
nucleic-acid-binding proteins containing a cold-shock domain
JOURNAL Eur. J. Biochem. 231 (1), 72-82 (1995)
PUBMED 7628487
COMMENT On or before Aug 1, 2016 this sequence version replaced L29064.1,
L29065.1, L29066.1, L29067.1, L29068.1, L29069.1, L29070.1,
L29071.1, L29072.1, L29073.1, AH003216.1.
FEATURES Location/Qualifiers
source 1..6670
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/map="12p13.1"
/tissue_type="placenta"
/tissue_lib="genomic phage"
exon 1355..1828
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/note="major transcriptional start site at bp 1355"
/number=1
CDS join(1567..1828,2171..2234,2654..2687,3104..3193,
3595..3717,4009..4215,4543..4640,5009..5159)
/experiment="experimental evidence, no additional details
recorded"
/codon_start=1
/product="DNA-binding protein A"
/protein_id="AAA79243.1"
/translation="MSEAGEATTTTTTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAA
APAPAAHVAGNPGGDAAPAATGTAAAASLAAAAGSEDAEKKVLATKVLGTVKWFNVRN
GYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP
DGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFDPPATDRQFSG
ARNQLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHPNRIQAGEIGEMKDGVPEGAQ
LQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQATSGPNQPSVRRGYRRPYN
YRRRPPSS"
intron order(1829..1881,1982..2170)
/experiment="experimental evidence, no additional details
recorded"
/number=1
gap 1882..1981
/estimated_length=unknown
exon 2171..2234
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=2
intron order(2235..2440,2541..2653)
/experiment="experimental evidence, no additional details
recorded"
/number=2
gap 2441..2540
/estimated_length=unknown
exon 2654..2687
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=3
intron order(2688..2852,2953..3103)
/experiment="experimental evidence, no additional details
recorded"
/number=3
gap 2853..2952
/estimated_length=unknown
exon 3104..3193
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=4
intron order(3194..3447,3548..3594)
/experiment="experimental evidence, no additional details
recorded"
/number=4
gap 3448..3547
/estimated_length=unknown
exon 3595..3717
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=5
intron order(3718..3774,3875..4008)
/experiment="experimental evidence, no additional details
recorded"
/number=5
gap 3775..3874
/estimated_length=unknown
exon 4009..4215
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=6
intron order(4216..4280,4381..4542)
/experiment="experimental evidence, no additional details
recorded"
/number=6
gap 4281..4380
/estimated_length=unknown
exon 4543..4640
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=7
intron order(4641..4724,4825..5008)
/experiment="experimental evidence, no additional details
recorded"
/number=7
gap 4725..4824
/estimated_length=unknown
exon 5009..5184
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=8
intron order(5185..5297,5398..5559)
/experiment="experimental evidence, no additional details
recorded"
/number=8
gap 5298..5397
/estimated_length=unknown
exon 5560..5659
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=9
intron order(5660..5755,5856..5918)
/experiment="experimental evidence, no additional details
recorded"
/number=9
gap 5756..5855
/estimated_length=unknown
exon 5919..6494
/product="DNA-binding protein A"
/experiment="experimental evidence, no additional details
recorded"
/number=10
regulatory 6462..6467
/regulatory_class="polyA_signal_sequence"
polyA_site 6485
/experiment="experimental evidence, no additional details
recorded"
BASE COUNT 1533 a 1297 c 1285 g 1655 t
ORIGIN
1 gaattcagga aagtttcata ataattgata gcaaatgtgc agataagtaa ttgagtttgg
61 aagaatttgg tctgttttca ttttgtaaac attcactatg tccaaactct gtgctacgta
121 ctgtactaac cagtggagat acaaagatga attacacttg atagttaccc tactgatgtt
181 aaggtagaca tcgacattac agacatattc ctggaaaaaa atttggtaaa ttgtttgagg
241 gaacaggcaa taacttaaaa aacaaacaaa acaaaggagc tttaggtgga ccggacactg
301 gagtgacaca tgataatctc atctactttt catgtcacct ttgagaacct ctcataaagc
361 aggaaaccga ctctgggaca ttgaatctct gtcccaagtt aacctggtta ataaaaaaca
421 aagccagaat ttatacctag tctgtctgaa ccctaggggc caaatagtcc tgtattccag
481 acagtctttg ggtacagatc ccagaccctc tggccctgtg tttactacca tccagcccat
541 tctcaaaggg catgtgggct cttcaacttg ggaataatct ttattgggtg atctgtttct
601 ctatacctct catcctcgag gctaagaggg ctcagttcct taagctttca ccagctggca
661 gaggcaactg gagcagaagg taggaagtgg atttattcag ctttttttgt gtgtgttcct
721 tattaaatat atattgacag ctccttattt gttgcggtta aattggtgta aactctgaat
781 ttacattaaa tctgtgaggt caatttcctc atctgcgtgt tacagatgaa attatccgta
841 tattaccttt caggagtaag ttgccaaata gtcttaaggt tttattattc caggtttaac
901 agctgtgcta cgatagctgc tggtgcttat acatgttgaa tgactgacta gatgcaagat
961 ttaaaaacaa gtgtttgaga gggtaaagcg cagagtagtt tgggtgccct attttacctc
1021 tccttgtcag ctgcgggtgt caagacgggt tgagggagga gagccaatgc accccgctcc
1081 aacaaagggt cagcagcgcg ggctcctcgg aacgctccag aagacaaccc gggcgccccg
1141 ttcaccctgg ctttccttgg ttctgcaagc gacccgcgcg ctcgcgtccc ggcggattgg
1201 agccatagaa aggcaacccg gcgcctttaa atgctaatga gaggtccagg gcccgactcc
1261 cgagccaagt ttccccaccc tctcccctcg cccgcccttc cctcccgggc cggtgcgccg
1321 cctagaaaaa cttgtgcggg gccatttttg gggcagtaag atcgagcgag gagcccaagg
1381 agcgagcgcg cagcacgaag ctcgagccgc ctccgccagc gcgaccccac ctcggccgcc
1441 ggcctgcgcc gcgagatccg ccccggcctc cccgagagcg agccccggcc gccgcgacca
1501 ccagccgcgc taaccgccga ccaaccgcca ccgaggcgcc tgagcgagag cagaggagga
1561 ggaggcatga gtgaggcggg cgaggccacc accaccacca ccaccaccct cccgcaggct
1621 ccgacggagg cggccgccgc ggctccccag gaccccgcgc ccaagagccc ggtgggcagc
1681 ggtgcgcccc aggccgcggc cccggcgccc gccgcccacg tcgcaggaaa ccccggtggg
1741 gacgcggccc ctgcagccac gggcaccgcg gccgccgcct ctttagccgc cgccgccggc
1801 agcgaagacg cggagaaaaa agttctcggt gagtcaggcc agggagggca ggggctgccg
1861 tagtggggcg ggcccagccg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1921 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1981 nctgaaaagt atttccttat gagatccttg gcttgctcca ttttcttttt ctaaagtatt
2041 ttggaattaa gcttttaatg gtttctttag gtatgtttta ggctttgtct aatgttatca
2101 agatcttagt gatatgagct atatctctct gtaggtcaga tactaattta tctgcttaat
2161 cctattttag ccaccaaagt ccttggcact gtcaaatggt tcaacgtcag aaatggatat
2221 ggatttataa atcggtatgt gtgtgcgtat atttgcatgt tttaagttta tacttacatt
2281 gtggcaccag gagttataaa tcccttagcc ttcattaata acttatataa attttttagg
2341 tttctaagca ctgtaaatat tctcatttct aagctactgg ttgttaaata ttacttaaaa
2401 tacatttcca ggacactaat aaataactta tttcataaaa nnnnnnnnnn nnnnnnnnnn
2461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2521 nnnnnnnnnn nnnnnnnnnn aaaatatatg ttgtgttttg aggacttggg agttaaattc
2581 ataacacata ggttctttta agtttttcca catacgtact acctttaatt gtgagctttt
2641 tgtctttcaa cagaaatgac accaaagaag atgtatttgt acatcaggta agagggatta
2701 taaatactac atttgctatg tgaggagagg gtgtgtaatc ttctgtcagc cctttcccaa
2761 aagtaagtcc tatggattat tattttaatc taaactcttt ctgtgattta ttttgcaaca
2821 ggagttcagt tccacatttt aagattggca aannnnnnnn nnnnnnnnnn nnnnnnnnnn
2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2941 nnnnnnnnnn nngtgttgga gatccaactt agtgggagaa tggtggaaaa aataagaatc
3001 ggtcaacagt tttcttcaag ttcactctgg tgacttgaaa gcagtgaaat ctgtggccaa
3061 tattgaaata tacatcgaat aaaattttct gttctctttc cagactgcca tcaagaagaa
3121 taacccacgg aaatatctgc gcagtgtagg agatggagaa actgtagagt ttgatgtggt
3181 tgaaggagag aaggtgagag gaaattgtgg ttgggtatca aagtgctggc acatagtact
3241 gttgcacaat aaattatcta tcagcccctt atgaattgac atgactttgg aatttttgta
3301 caatagcagg aagtgacttt taaacagaat tttttttttt tttaagatgg ggtctccctc
3361 ttgcccaggc tggagtgcag tggcgcgatc ttggttcact gcaacttcca ccatccaggt
3421 tcaagtgatt cctctgcctc agtctccnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3541 nnnnnnnggt atattgtttt taattttgag gccatctttt tattttcttc tcagggtgca
3601 gaagctgcca atgtgactgg cccggatgga gttcctgtgg aagggagtcg ttacgctgca
3661 gatcggcgcc gttacagacg tggctactat ggaaggcgcc gtggccctcc ccggaatgta
3721 cgttgtctct gttacttaac cagtgattga gaaattgttc atgcatggaa ttaannnnnn
3781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnncatttt gtctgtataa tggaaaggat
3901 tatattgctt tggggagatt ttattttggt gatattcatc ctaaatggtg ttctttggtt
3961 ctttccttgc taaaacttct tctgaatctc tgtttctttc ttcgctagta cgctggggag
4021 gaggaggagg aagggagcgg cagcagtgaa ggatttgacc cccctgccac tgataggcag
4081 ttctctgggg cccggaatca gctgcgccgc ccccagtatc gccctcagta ccggcagcgg
4141 cggttcccgc cttaccacgt gggacagacc tttgaccgtc gctcacgggt cttaccccat
4201 cccaacagaa tacaggtaaa attgcaactg agacttctct tcagcaatcc tcacccttcc
4261 gtccttctct gcctcctctt nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4381 aagatttact cataaatagt ttgtgttgca actgagagtg cctaattttg taatgaagca
4441 ttttgttttt tacttctaaa aaaaattctg aacatagctg tatgcactgt gtcttatccc
4501 ctgtgctgtg acactcactg tcagctctca ttgcctctcc aggctggtga gattggagag
4561 atgaaggatg gagtcccaga gggagcacaa cttcagggac cggttcatcg aaatccaact
4621 taccgcccaa ggtaccgtag gtatgtcgca tttccactaa tggccagtta aaggacttgt
4681 gtgcacaatg gtagaatgag gactgtgtgg ttccgttttg tggannnnnn nnnnnnnnnn
4741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4801 nnnnnnnnnn nnnnnnnnnn nnnnaaactc ctgacctcaa gtgatccgcc tgcctcagcc
4861 tcccgaagtg ctgggattac aggggtgagc catcatgcct ggccctgatc acttgacttt
4921 ttaattttta aaaataaata aaaccttatt ttctggagaa gccctgtcct gttggcacct
4981 gttctatttt cttctgtgtt ccctacagca ggggacctcc tcgcccacga cctgccccag
5041 cagttggaga ggctgaagat aaagaaaatc agcaagccac cagtggtcca aaccagccgt
5101 ctgttcgccg tggataccgg cgtccctaca attaccggcg tcgcccgccg tcctcctaac
5161 gctccttcac aagatggcaa agaggtaaat ccaaccagtc agggcagatg ttgccagata
5221 gtctttaatc atgtcagact ttagcattct aaaagtggtt ttatcacatg aaacctgaca
5281 cttaacaaat acaaaaannn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
5341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnngga
5401 ctgatatggt actaatttgt gactcatact taagagtagt taaatttttg catgctaatt
5461 ttccttcaca ggaaaattca aacttttaag aactttcagt cttgaacttt ccactgtcat
5521 ctgcatttat ctgatttatg gctttgtttt gcattttagg ccaaggcagg tgaagcacca
5581 actgagaacc ctgctccacc cacccagcag agcagtgctg agtaacacca ggctcctcag
5641 gcaccttcac catcggcagg taagagctgg ggcagcccag tcttgagttg gtattttctt
5701 tttagtatca ctggtttctc aacaagagta caaattagtc taaactagtt ctgcannnnn
5761 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
5821 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnntttta ttctttaact catggttact
5881 ttgtcactct ttataagttt gattttaatt tttcccaggt ggacctaaag aattaatgac
5941 cattcagaaa taaagcaaaa agcaggccac aaccttaacc aacaccaaag aaacatccaa
6001 gcaataaagt ggaagactaa ccaagatttg gacattggaa tgtttactgt tattctttaa
6061 gaaacaacta caaaaagaaa atgtcaacaa atttttccag caagctgaga acctgggaat
6121 tcctgcacgg aagacaagag agtagcctct ccagtttcag caaccgctag gtttctattt
6181 tttttccctg gtttttactg ttttggtaat atatatattg aaacaagaaa tattaatacc
6241 acatggggag aaccccaacc aaagaaatct gaaatatata gtaaatgctt ttttttccgt
6301 ttttgttcat tttggatgct ggtgctaaac ctccaagtgt catgatttaa aaaaaaaaaa
6361 aatttatgtc cttcttattt atttctagga tgaggggagg aaaacatttt tgctttctta
6421 tgtgactctc tttgaaaatg tgcagtaaga aattcctcaa aaataaaatt tttacccttc
6481 agaggacaga atgtttaatg ggagtgtatt tttgccgacc ttagcgtgtg tttgtcttct
6541 ccaccacttg atttacttga cttgattaat agtaaattca aagccaaatg taaagttaag
6601 ttaatgctat ttcacaaatt taggcatata agcttgagat gataaaaaat tggattcctg
6661 ttgaaatgta
//