LOCUS HUMNCOLL 2157 bp mRNA linear HUM 12-JUN-1993
DEFINITION Homo sapiens collagen chain mRNA, 3' end.
ACCESSION L12347
VERSION L12347.1
KEYWORDS collagen.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2157)
AUTHORS Myers,J.C., Sun,M.J., D'Ippolito,J.A., Jabs,E.W., Neilson,E.G. and
Dion,A.S.
TITLE Human cDNA clones transcribed from an unusually
high-molecular-weight RNA encode a new collagen chain
JOURNAL Gene 123 (2), 211-217 (1993)
PUBMED 7916703
COMMENT Original source text: Homo sapiens (library: ATCC L136, Stratagene)
female embryonal cDNA to mRNA.
FEATURES Location/Qualifiers
source 1..2157
/db_xref="H-InvDB:HIT000192169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/map="chromosome 6"
/sex="female"
/cell_line="rhabdomyosarcoma"
/dev_stage="embryonal"
/tissue_lib="ATCC L136, Stratagene"
CDS <1..2157
/codon_start=1
/product="collagen"
/protein_id="AAA36358.1"
/translation="ETTVPFWRFFVLETWQVLNQQNIPQISIVVDGGKKVVEFMFQAT
EGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDCNLIARRQTDEKDTVDFHG
RTVIATRASDGKPVDIELHQLKIYCSANLIAQETCCEISDTKCPEQDGFGNIASSWVT
AHASKMSSYLPAKQELKDQCQCIPNKGEAGLPGAPGSPGQKGHKGEPGENGLHGAPGF
PGQKGEQGFEGSKGETGEKGEQGEKGDPALAGLNGENGLKGDLGPHGPPGPKGEKGDT
GPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLG
GYYNKDNKGNDEHEAGGLKGDKGETGLPGFPGSVGPKGQKGEPGEPFTKGEKGDRGEP
GVIGSQGVKGEPGDPGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQG
IKGEKGDPGGIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGV
HGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPRGLPGLPGTPGTPGNDGVPGRDGKPG
LPGPPGDPIALPLLGDIGALLKNFCGNCQASVPGLKSNKGEEGGAGEPGKYDSMARKG
DIGPRGPPGIPGREGPKGSKGERGYPGIPGEKGDEGLQGIPGIPGAPGPTGPPGLMGR
TGHPGPTGAKGEKGSDGPPGKPGPPGPPVSCSRLKI"
BASE COUNT 643 a 468 c 637 g 409 t
ORIGIN
1 gaaaccaccg ttcctttttg gcgtttcttc gtactcgaaa catggcaggt tttaaaccag
61 cagaatattc cacagatttc tatagtagtt gatggtggaa agaaggtggt ggaatttatg
121 tttcaagcca cagagggaga tgtgttgaac tacattttta gaaatcgaga actccgtcct
181 ttgtttgatc gtcagtggca caaacttggc attagtatac aatcccaggt catttcactt
241 tatatggatt gtaatttaat tgcgaggagg cagactgatg aaaaggacac tgtggatttc
301 catggacgga cagttattgc tacgcgagct tcagatggca agcctgtgga tattgaactt
361 caccaactta aaatctactg cagtgcaaac ctcatagctc aagaaacatg ttgtgaaata
421 tcagatacta agtgcccaga gcaggatggc tttggaaata ttgcatcatc atgggtaact
481 gctcatgcca gtaaaatgtc ttcatatctg ccagcaaagc aggaacttaa agaccagtgc
541 cagtgcattc caaacaaggg agaagcagga ttaccaggag ctccgggttc acctgggcag
601 aaagggcata aaggagagcc gggtgaaaat ggtttacatg gtgctccagg attccctggt
661 caaaagggag agcaaggttt tgaaggcagc aaaggagaaa ctggtgaaaa gggtgaacaa
721 ggagaaaaag gagatccagc tctggctggc cttaatggag aaaatggttt gaaaggtgac
781 ttgggtcctc atggtccacc tggcccaaaa ggagaaaagg gagatacagg acccccagga
841 ccaccagcct tacctggttc cctggggata caaggccccc aaggtccacc tggaaaagag
901 ggtcagaggg gaagacgagg gaaaacagga cctcccggaa aaccaggacc cccaggacca
961 cctggacctc ctggaataca aggaatacac caaactcttg gtggatatta taacaaggat
1021 aacaagggaa atgatgaaca tgaagctgga ggcctgaaag gagacaaggg tgaaactgga
1081 ctaccaggat ttccagggtc tgttggccct aaaggacaaa aaggagaacc tggagagcct
1141 tttacaaaag gagaaaaagg agatagagga gaacctgggg taataggatc acagggagta
1201 aagggtgaac ctggagatcc cggaccccct ggtttaatag gaagcccagg actaaagggt
1261 cagcaaggat ctgcaggctc catgggaccc agaggaccgc caggagatgt tggattgcca
1321 ggagaacatg gtatcccagg aaaacaaggc attaaaggag aaaagggaga tccaggtggg
1381 atcataggcc ctcccgggct tccaggtcca aaaggtgagg ctggtcctcc agggaaaagc
1441 ctgccagggg aaccaggatt agatggaaat cctggagcac ctggtccacg tgggccaaag
1501 ggtgaaagag gacttccagg tgttcacggt tccccagggg acataggccc acaagggata
1561 ggaattcctg gcagaacagg cgcccaagga ccagctggag agccaggtat tcagggtcct
1621 cgaggtctcc ctgggttgcc aggaactcca gggactccag ggaatgatgg agttccaggg
1681 agagatggaa agccaggcct gccaggcccc ccaggtgacc cgattgcact tcctctcttg
1741 ggagacatcg gtgctttgct caagaatttc tgtggcaact gccaagccag tgtcccaggg
1801 ctgaaaagca acaaaggaga agaaggaggt gctggtgagc ctggaaagta tgattccatg
1861 gcccggaagg gtgatatagg gccacggggt cctccaggaa tcccaggaag agagggacca
1921 aagggaagca aaggagagcg gggctaccct gggatacctg gggagaaagg tgatgagggt
1981 cttcaaggaa ttccaggcat tccaggtgct ccaggcccga ctggaccccc tggcttaatg
2041 ggaagaactg gacatcctgg tcccacagga gcaaaaggtg aaaagggcag cgacggaccc
2101 cctgggaaac ccggaccacc tggaccacct gtgagttgtt ctaggcttaa aatttaa
//