LOCUS HUMCOLVIIA 1986 bp mRNA linear HUM 27-FEB-1996
DEFINITION Human type VII collagen (COL7A1) mRNA, 3' end.
ACCESSION L06862
VERSION L06862.1
KEYWORDS structural protein; type VII collagen.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1986)
AUTHORS Greenspan,D.S.
TITLE The carboxyl-terminal half of type VII collagen, including the
non-collagenous NC-2 domain and intron/exon organization of the
corresponding region of the COL7A1 gene
JOURNAL Hum. Mol. Genet. 2 (3), 273-278 (1993)
PUBMED 8499916
COMMENT Original source text: Homo sapiens cDNA to mRNA.
FEATURES Location/Qualifiers
source 1..1986
/db_xref="H-InvDB:HIT000191727"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="placenta"
/tissue_lib="lambda-gt10"
gene 1..1986
/gene="COL7A1"
CDS <1..1653
/gene="COL7A1"
/note="base pairs 1-1167: triple-helix encoding region;
base pairs 1168-1653: non-collagenous NC-2 domain encoding
region"
/codon_start=1
/product="type VII collagen"
/protein_id="AAA89196.1"
/translation="GLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGP
LGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTG
PPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRG
DNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGE
KGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQS
GAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPG
SVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALT
EDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAADTAGSQLHAVPVLRVSHAEEEER
VPPEDDEYSEYSEYSVEEYQDPEAPWDSDDPCSLPLDEGSCTAYTLRWYHRAVTGSTE
ACHPFVYGGCGGNANRFGTREACERRCPPRVVQSQGTGTAQD"
3'UTR 1654..1986
/gene="COL7A1"
regulatory 1963..1968
/regulatory_class="polyA_signal_sequence"
/gene="COL7A1"
polyA_site 1986
/gene="COL7A1"
BASE COUNT 377 a 539 c 742 g 328 t
ORIGIN
1 ggcctgcccg gtgctcctgg tgttgttggg ttcccgggtc agacaggccc tcgaggagag
61 atgggtcagc caggccctag tggagagcgg ggtctggcag gccccccagg gagagaagga
121 atcccaggac ccctggggcc acctggacca ccggggtcag tgggaccacc tggggcctct
181 ggactcaaag gagacaaggg agaccctgga gtagggctgc ctgggccccg aggcgagcgt
241 ggggagccag gcatccgggg tgaagatggc cgccccggcc aggagggacc ccgaggactc
301 acggggcccc ctggcagcag gggagagcgt ggggagaagg gtgatgttgg gagtgcagga
361 ctaaagggtg acaagggaga ctcagctgtg atcctggggc ctccaggccc acggggtgcc
421 aagggggaca tgggtgaacg agggcctcgg ggcttggatg gtgacaaagg acctcgggga
481 gacaatgggg accctggtga caagggcagc aagggagagc ctggtgacaa gggctcagcc
541 gggttgccag gactgcgtgg actcctggga ccccagggtc aacctggtgc agcagggatc
601 cctggtgacc cgggatcccc aggaaaggat ggagtgcctg gtatccgagg agaaaaagga
661 gatgttggct tcatgggtcc ccggggcctc aagggtgaac ggggagtgaa gggagcctgt
721 ggccttgatg gagagaaggg agacaaggga gaagctggtc ccccaggccg ccccgggctg
781 gcaggacaca aaggagagat gggggagcct ggtgtgccgg gccagtcggg ggcccctggc
841 aaggagggcc tgatcggtcc caagggtgac cgaggctttg acgggcagcc aggccccaag
901 ggtgaccagg gcgagaaagg ggagcgggga accccaggaa ttgggggctt cccaggcccc
961 agtggaaatg atggctctgc tggtccccca gggccacctg gcagtgttgg tcccagaggc
1021 cccgaaggac ttcagggcca gaagggtgag cgaggtcccc ccggagagag agtggtgggg
1081 gctcctgggg tccctggagc tcctggcgag agaggggagc aggggcggcc agggcctgcc
1141 ggtcctcgag gcgagaaggg agaagctgca ctgacggagg atgacatccg gggctttgtg
1201 cgccaagaga tgagtcagca ctgtgcctgc cagggccagt tcatcgcatc tggatcacga
1261 cccctcccta gttatgctgc agacactgcc ggctcccagc tccatgctgt gcctgtgctc
1321 cgcgtctctc atgcagagga ggaagagcgg gtaccccctg aggatgatga gtactctgaa
1381 tactccgagt attctgtgga ggagtaccag gaccctgaag ctccttggga tagtgatgac
1441 ccctgttccc tgccactgga tgagggctcc tgcactgcct acaccctgcg ctggtaccat
1501 cgggctgtga caggcagcac agaggcctgt cacccttttg tctatggtgg ctgtggaggg
1561 aatgccaacc gttttgggac ccgtgaggcc tgcgagcgcc gctgcccacc ccgggtggtc
1621 cagagccagg ggacaggtac tgcccaggac tgaggcccag ataatgagct gagattcagc
1681 atcccctgga ggagtcgggg tctcagcaga accccactgt ccctcccctt ggtgctagag
1741 gcttgtgtgc acgtgagcgt gcgagtgcac gtccgttatt tcagtgactt ggtcccgtgg
1801 gtctagcctt cccccctgtg gacaaacccc cattgtggct cctgccaccc tggcagatga
1861 ctcactgtgg gggggtggct gtgggcagtg agcggatgtg actggcgtct gacccgcccc
1921 ttgacccaag cctgtgatga catggtgctg attctggggg gcattaaagc tgctgtttta
1981 aaaggc
//