LOCUS KM655603 2130 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Cdh2 mRNA, partial cds.
ACCESSION KM655603
VERSION KM655603.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 2130)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 2130)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2130
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>2130
/codon_start=1
/product="Cdh2"
/protein_id="AJG05949.1"
/translation="MDPSGGVMLGLLAALQVAVQGTGAMPCQPGFTENEYNVMTADVI
TEGQVLLKVDFVDCGRGSGLRFESGDPADFRIDADGTVMAARTLQLTDRKGQSLEIKA
KDENSQEQWMVHINFTQPKQVPVILFPRHSVLVKGDDSVNRVKRDWVIPPVNVLENSR
KQFPEELVKIQSDKDKSNTLRYSVTGPGADQNPTGLFIIDPISGLLSVTKPLDREHIP
NFHLRAHAVDINGNQMENPIDIIINVIDMNDNRPEFTHQIWNGTVDEGAKPGTFVMTV
TSQDKDDPNTANGMLRYKILSQTPESPSSNMFTINNKTGKIITVAAGLDREKVPQYTL
IIQATDMEGNPTYGLSNTATAVIRLLDVNDNAPEFTRETFHGEVPENRVNVIVTNLTV
TDKDEPGTPAWNAVYRIISGDPTGRFSIPTDPVTNEGLVTVVKPVDFEMNRSFMLTVV
ADNEVPLASGIHRTRQSTATVSIRVIDVNESPNFDPNPKQIKLEEGLPQWSMLTTFTA
HDPDRYMQQTISYSKLYDPANWLEIDPNNGRISTIAVLDRESPYVKNNLYNATFMASD
NGVPRASGTGTLQIYLLDINDNAPRVFPQEAEVCERPEPNAINITAVDGDLNPNAGPY
AFELPNRPSDIRRNWTLTRISGDHAQLSLKISYLESGIYELPISITDSGNLPMSNTTY
LRIKVCQCDHHGDCVDMERIMAAGLGTG"
BASE COUNT 583 a 590 c 518 g 439 t
ORIGIN
1 atggacccct ccggaggcgt gatgctgggg cttctcgccg ctctgcaggt ggcggtccag
61 ggcacagggg cgatgccatg tcagcctggt ttcaccgaga acgagtacaa cgtcatgaca
121 gccgacgtca tcaccgaggg acaagttctg ctcaaagtgg attttgtgga ctgtggcaga
181 ggttccggcc tgcgctttga gagtggcgac cctgcagatt tccggataga cgccgatggg
241 acagttatgg cagcacggac acttcagctc accgacagaa aggggcagag cttggagatt
301 aaagccaagg atgagaattc tcaagagcag tggatggtac acatcaactt cactcaaccc
361 aaacaggtgc cagtgatact gtttcctcgg cacagtgtgc ttgtcaaggg cgacgacagt
421 gtgaatcgcg tgaaaagaga ctgggtcatt cctcctgtca acgtgctgga gaactccaga
481 aaacaattcc ccgaagagct tgtgaaaatc cagtctgata aggacaagag caacacgctg
541 cgctacagtg tgaccggacc aggagcagac caaaacccta ctggcctgtt tatcatcgac
601 cccatttcag gacttctctc tgtcaccaaa ccgctggaca gagaacacat ccccaacttt
661 catctgcgtg ctcatgcagt ggacatcaat ggaaaccaga tggagaatcc catcgacatc
721 atcatcaatg tcatcgatat gaatgacaac cggccagagt tcacacacca gatctggaat
781 gggaccgtgg atgagggtgc caaaccagga acattcgtaa tgacagtgac ctcccaggat
841 aaggatgacc caaatacagc caacgggatg ctgcgataca aaatcctctc tcagacccca
901 gagagcccct catccaacat gttcactatc aacaacaaaa ccggcaaaat catcacagta
961 gctgcaggcc tggaccgtga gaaggtgcct cagtacaccc tgatcatcca ggctaccgat
1021 atggaaggaa accccacgta tggtctgtcc aacaccgcca ctgctgtcat acgcctgctg
1081 gatgtcaatg acaacgctcc cgagttcacc cgagagactt tccatggtga ggtcccagag
1141 aaccgtgtga atgtgatagt gaccaatctc accgtgaccg acaaagatga accggggact
1201 ccagcctgga atgctgtgta ccggatcata tccggggacc cgaccggacg cttctccatt
1261 cctactgacc ctgtcacaaa tgaaggcctt gtcaccgttg ttaagccagt tgatttcgag
1321 atgaatcgat cattcatgct gactgttgtc gctgacaatg aagtgccact agcgagtgga
1381 atccatcgca cacgccagtc tacagccacc gtatccatcc gcgtcatcga tgtgaacgaa
1441 agccccaact ttgaccccaa ccccaaacag atcaaactgg aggagggtct tccgcagtgg
1501 tcaatgctaa cgactttcac agctcatgat ccagacagat atatgcagca gactattagt
1561 tactctaaat tatacgaccc cgccaactgg ttggagatcg acccaaacaa cggacgaatt
1621 tccaccattg ctgttttgga tcgagaatct ccttacgtga aaaataacct ttacaacgcc
1681 acattcatgg cttcagacaa tggtgtgccc cgtgcaagtg ggactggaac actgcagatt
1741 tacttgttgg acataaatga taacgcacct cgcgtcttcc cacaagaagc agaagtgtgt
1801 gagcgtcccg aacccaatgc cattaatatc acagcagtag acggagatct caatcccaac
1861 gctggaccct acgcttttga actgcccaat cggccctcag acatccgaag aaactggaca
1921 ctgacccgaa tcagtggcga tcatgctcag ctgagtctga agattagtta cctggaaagt
1981 ggcatttacg agctacccat cagcatcaca gactcgggta acctgcccat gtccaacacc
2041 acttacctgc gcattaaagt gtgccagtgc gatcatcatg gtgactgtgt ggacatggag
2101 cgcatcatgg cagccgggct gggcaccgga
//