LOCUS       JX093078                2240 bp    mRNA    linear   HUM 08-AUG-2012
DEFINITION  Homo sapiens sterile alpha motif domain containing 11 splice
            variant ASV13 (SAMD11) mRNA, complete cds, alternatively spliced.
ACCESSION   JX093078
VERSION     JX093078.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Identification and expression analysis of novel alternative splice
            variants of SAMD11
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology,
            Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie
            Road, Guangzhou, Guangdang 510060, China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: DNAstar v. 7.10
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /db_xref="H-InvDB:HIT000721893"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     gene            1..2240
                     /gene="SAMD11"
     CDS             1..1767
                     /gene="SAMD11"
                     /note="alternatively spliced"
                     /codon_start=1
                     /product="sterile alpha motif domain containing 11 splice
                     variant ASV13"
                     /protein_id="AFP36429.1"
                     /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK
                     KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS
                     QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD
                     CFSEKRARSESPQEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPS
                     HGEDPPWHDPPHHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHR
                     EGAAPAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLP
                     PAQAEMFARQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQ
                     RRGALLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEM
                     TGARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLP
                     LGFPYAVSPYFHTGGHPHTLDPSRGHRTGRPPVEGSWGEEKFPLGTHPPPQQLGHTTV
                     RRRAGMGKPARALVTRPTTQAR"
BASE COUNT          387 a          805 c          730 g          318 t
ORIGIN      
        1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata
       61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc
      121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg
      181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt
      241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc
      301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc
      361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg
      421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac
      481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag aggcgctgct gctgccgcgg
      541 gagctggggc ccagcatggc cccggaggac cattaccgcc ggcttgtgtc agcactgagc
      601 gaggccagca cctttgagga ccctcagcgc ctctaccacc tgggcctccc cagccacggt
      661 gaggacccac cctggcatga tccccctcat cacctcccca gccacgatct cctgagggtc
      721 cggcaggagg tggcggctgc agctctgagg ggccccagtg gcctggaagc ccacctgccc
      781 tcctccacgg caggtcagcg tcggaagcag ggcctggctc agcaccggga gggcgccgcc
      841 ccagctgccg ccccgtcctt ctcggagagg gagctgcctc agccgccccc cttgctgtcg
      901 ccgcagaatg cccctcacgt cgccctgggc ccccatctca ggcccccctt cctgggggtg
      961 ccctcggctc tgtgccagac cccaggctac ggcttcctgc cccccgcgca ggcggagatg
     1021 ttcgcccggc agcaggagct cctgcggaag cagaacctgg cccggctgga gctgcccgcc
     1081 gacctcctgc ggcagaagga gctggagagc gcgcgcccac agctgctggc gcccgagacc
     1141 gccctgcgcc ccaacgacgg cgccgaggag ctgcagcggc gcggggccct gctggtgctg
     1201 aaccacggcg cggcgccact gctggccctg cccccccagg ggcccccggg ctccggaccc
     1261 cccaccccgt cccgggactc tgcccggcga gccccccgga aggggggtcc cggccctgcc
     1321 tcagcgcggc ccagcgagtc caaggagatg acgggggcta ggctctgggc acaagatggc
     1381 tcggaagacg agccccccaa agactcggac ggagaggacc ccgagacggc agctgttggg
     1441 tgcagggggc ccactccggg ccaagctcca gctggagggg ccggcgccga ggggaagggg
     1501 cttttcccag ggtccacact gcccctgggc ttcccttatg ccgtcagccc ctacttccac
     1561 acaggtgggc acccccacac tctagatcct tccagagggc acaggactgg caggccgcct
     1621 gtggaagggt cttgggggga ggaaaaattc cccttaggca cccatccccc acctcagcaa
     1681 ttggggcaca cgacggtcag gagacgggcg ggtatgggaa agccagccag agccctagta
     1741 acacgcccca caactcaggc gcggtagggg gactctccat ggatggggag gaggccccag
     1801 cccctgagga cgtcaccaag tggaccgtgg atgacgtctg cagcttcgtg gggggcctgt
     1861 ctggctgtgg agagtacact cgggtcttca gggagcaggg gatcgacggg gagaccctgc
     1921 cactgctgac ggaggagcac ctgctgacca acatggggct gaagctgggg cccgccctca
     1981 agatccgggc ccaggtggcc aggcgcctgg gccgagtttt ctacgtggcc agcttccccg
     2041 tggctctgcc actgcagcca ccaaccctgc gggccccgga gcgagaactc ggcacaggag
     2101 agcagccctt gtcccccacg acggccacgt ccccctatgg agggggccac gcccttgccg
     2161 gtcaaacttc acccaagcag gagaatggga ccttggctct acttccaggg gcccccgacc
     2221 cttcccagcc tctgtgttga
//