LOCUS JX093078 2240 bp mRNA linear HUM 08-AUG-2012 DEFINITION Homo sapiens sterile alpha motif domain containing 11 splice variant ASV13 (SAMD11) mRNA, complete cds, alternatively spliced. ACCESSION JX093078 VERSION JX093078.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2240) AUTHORS Jin,G.J. and Shen,H. TITLE Identification and expression analysis of novel alternative splice variants of SAMD11 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2240) AUTHORS Jin,G.J. and Shen,H. TITLE Direct Submission JOURNAL Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie Road, Guangzhou, Guangdang 510060, China COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.10 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2240 /db_xref="H-InvDB:HIT000721893" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..2240 /gene="SAMD11" CDS 1..1767 /gene="SAMD11" /note="alternatively spliced" /codon_start=1 /product="sterile alpha motif domain containing 11 splice variant ASV13" /protein_id="AFP36429.1" /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD CFSEKRARSESPQEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPS HGEDPPWHDPPHHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHR EGAAPAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLP PAQAEMFARQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQ RRGALLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEM TGARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLP LGFPYAVSPYFHTGGHPHTLDPSRGHRTGRPPVEGSWGEEKFPLGTHPPPQQLGHTTV RRRAGMGKPARALVTRPTTQAR" BASE COUNT 387 a 805 c 730 g 318 t ORIGIN 1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata 61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc 121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg 181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt 241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc 301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc 361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg 421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac 481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag aggcgctgct gctgccgcgg 541 gagctggggc ccagcatggc cccggaggac cattaccgcc ggcttgtgtc agcactgagc 601 gaggccagca cctttgagga ccctcagcgc ctctaccacc tgggcctccc cagccacggt 661 gaggacccac cctggcatga tccccctcat cacctcccca gccacgatct cctgagggtc 721 cggcaggagg tggcggctgc agctctgagg ggccccagtg gcctggaagc ccacctgccc 781 tcctccacgg caggtcagcg tcggaagcag ggcctggctc agcaccggga gggcgccgcc 841 ccagctgccg ccccgtcctt ctcggagagg gagctgcctc agccgccccc cttgctgtcg 901 ccgcagaatg cccctcacgt cgccctgggc ccccatctca ggcccccctt cctgggggtg 961 ccctcggctc tgtgccagac cccaggctac ggcttcctgc cccccgcgca ggcggagatg 1021 ttcgcccggc agcaggagct cctgcggaag cagaacctgg cccggctgga gctgcccgcc 1081 gacctcctgc ggcagaagga gctggagagc gcgcgcccac agctgctggc gcccgagacc 1141 gccctgcgcc ccaacgacgg cgccgaggag ctgcagcggc gcggggccct gctggtgctg 1201 aaccacggcg cggcgccact gctggccctg cccccccagg ggcccccggg ctccggaccc 1261 cccaccccgt cccgggactc tgcccggcga gccccccgga aggggggtcc cggccctgcc 1321 tcagcgcggc ccagcgagtc caaggagatg acgggggcta ggctctgggc acaagatggc 1381 tcggaagacg agccccccaa agactcggac ggagaggacc ccgagacggc agctgttggg 1441 tgcagggggc ccactccggg ccaagctcca gctggagggg ccggcgccga ggggaagggg 1501 cttttcccag ggtccacact gcccctgggc ttcccttatg ccgtcagccc ctacttccac 1561 acaggtgggc acccccacac tctagatcct tccagagggc acaggactgg caggccgcct 1621 gtggaagggt cttgggggga ggaaaaattc cccttaggca cccatccccc acctcagcaa 1681 ttggggcaca cgacggtcag gagacgggcg ggtatgggaa agccagccag agccctagta 1741 acacgcccca caactcaggc gcggtagggg gactctccat ggatggggag gaggccccag 1801 cccctgagga cgtcaccaag tggaccgtgg atgacgtctg cagcttcgtg gggggcctgt 1861 ctggctgtgg agagtacact cgggtcttca gggagcaggg gatcgacggg gagaccctgc 1921 cactgctgac ggaggagcac ctgctgacca acatggggct gaagctgggg cccgccctca 1981 agatccgggc ccaggtggcc aggcgcctgg gccgagtttt ctacgtggcc agcttccccg 2041 tggctctgcc actgcagcca ccaaccctgc gggccccgga gcgagaactc ggcacaggag 2101 agcagccctt gtcccccacg acggccacgt ccccctatgg agggggccac gcccttgccg 2161 gtcaaacttc acccaagcag gagaatggga ccttggctct acttccaggg gcccccgacc 2221 cttcccagcc tctgtgttga //