LOCUS       JX093076                1860 bp    mRNA    linear   HUM 08-AUG-2012
DEFINITION  Homo sapiens sterile alpha motif domain containing 11 splice
            variant ASV11 (SAMD11) mRNA, complete cds, alternatively spliced.
ACCESSION   JX093076
VERSION     JX093076.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Identification and expression analysis of novel alternative splice
            variants of SAMD11
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology,
            Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie
            Road, Guangzhou, Guangdang 510060, China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: DNAstar v. 7.10
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /db_xref="H-InvDB:HIT000721891"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     gene            1..1860
                     /gene="SAMD11"
     CDS             1..1860
                     /gene="SAMD11"
                     /note="alternatively spliced"
                     /codon_start=1
                     /product="sterile alpha motif domain containing 11 splice
                     variant ASV11"
                     /protein_id="AFP36427.1"
                     /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPVARNLK
                     KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS
                     QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD
                     CFSEKRARSESPQDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAA
                     PAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQA
                     EMFARQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGA
                     LLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGAR
                     LWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFP
                     YAVSPYFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGI
                     DGETLPLLTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVALPLQPPTLRAP
                     ERELGTGEQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC"
BASE COUNT          310 a          666 c          618 g          266 t
ORIGIN      
        1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata
       61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgtcgcc
      121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg
      181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt
      241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc
      301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc
      361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg
      421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac
      481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag atctcctgag ggtccggcag
      541 gaggtggcgg ctgcagctct gaggggcccc agtggcctgg aagcccacct gccctcctcc
      601 acggcaggtc agcgtcggaa gcagggcctg gctcagcacc gggagggcgc cgccccagct
      661 gccgccccgt ccttctcgga gagggagctg cctcagccgc cccccttgct gtcgccgcag
      721 aatgcccctc acgtcgccct gggcccccat ctcaggcccc ccttcctggg ggtgccctcg
      781 gctctgtgcc agaccccagg ctacggcttc ctgccccccg cgcaggcgga gatgttcgcc
      841 cggcagcagg agctcctgcg gaagcagaac ctggcccggc tggagctgcc cgccgacctc
      901 ctgcggcaga aggagctgga gagcgcgcgc ccacagctgc tggcgcccga gaccgccctg
      961 cgccccaacg acggcgccga ggagctgcag cggcgcgggg ccctgctggt gctgaaccac
     1021 ggcgcggcgc cactgctggc cctgcccccc caggggcccc cgggctccgg accccccacc
     1081 ccgtcccggg actctgcccg gcgagccccc cggaaggggg gtcccggccc tgcctcagcg
     1141 cggcccagcg agtccaagga gatgacgggg gctaggctct gggcacaaga tggctcggaa
     1201 gacgagcccc ccaaagactc ggacggagag gaccccgaga cggcagctgt tgggtgcagg
     1261 gggcccactc cgggccaagc tccagctgga ggggccggcg ccgaggggaa ggggcttttc
     1321 ccagggtcca cactgcccct gggcttccct tatgccgtca gcccctactt ccacacaggc
     1381 gcggtagggg gactctccat ggatggggag gaggccccag cccctgagga cgtcaccaag
     1441 tggaccgtgg atgacgtctg cagcttcgtg gggggcctgt ctggctgtgg agagtacact
     1501 cgggtcttca gggagcaggg gatcgacggg gagaccctgc cactgctgac ggaggagcac
     1561 ctgctgacca acatggggct gaagctgggg cccgccctca agatccgggc ccaggtggcc
     1621 aggcgcctgg gccgagtttt ctacgtggcc agcttccccg tggctctgcc actgcagcca
     1681 ccaaccctgc gggccccgga gcgagaactc ggcacaggag agcagccctt gtcccccacg
     1741 acggccacgt ccccctatgg agggggccac gcccttgccg gtcaaacttc acccaagcag
     1801 gagaatggga ccttggctct acttccaggg gcccccgacc cttcccagcc tctgtgttga
//