LOCUS       JX093075                1860 bp    mRNA    linear   HUM 08-AUG-2012
DEFINITION  Homo sapiens sterile alpha motif domain containing 11 splice
            variant ASV10 (SAMD11) mRNA, complete cds, alternatively spliced.
ACCESSION   JX093075
VERSION     JX093075.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Identification and expression analysis of novel alternative splice
            variants of SAMD11
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology,
            Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie
            Road, Guangzhou, Guangdang 510060, China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: DNAstar v. 7.10
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /db_xref="H-InvDB:HIT000721890"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     gene            1..1860
                     /gene="SAMD11"
     CDS             1..1860
                     /gene="SAMD11"
                     /note="alternatively spliced"
                     /codon_start=1
                     /product="sterile alpha motif domain containing 11 splice
                     variant ASV10"
                     /protein_id="AFP36426.1"
                     /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK
                     KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS
                     QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD
                     CFSEKRARSESPQAEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLP
                     SHGEDPPWHDPPHHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQH
                     REGAAPAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFL
                     PPAQAEMFARQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEEL
                     QRRGALLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKE
                     MTGARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTL
                     PLGFPYAVSPYFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFPVALPLQPPTLRAP
                     ERELGTGEQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC"
BASE COUNT          312 a          690 c          598 g          260 t
ORIGIN      
        1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata
       61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc
      121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg
      181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt
      241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc
      301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc
      361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg
      421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac
      481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag cagaggcgct gctgctgccg
      541 cgggagctgg ggcccagcat ggccccggag gaccattacc gccggcttgt gtcagcactg
      601 agcgaggcca gcacctttga ggaccctcag cgcctctacc acctgggcct ccccagccac
      661 ggtgaggacc caccctggca tgatccccct catcacctcc ccagccacga tctcctgagg
      721 gtccggcagg aggtggcggc tgcagctctg aggggcccca gtggcctgga agcccacctg
      781 ccctcctcca cggcaggtca gcgtcggaag cagggcctgg ctcagcaccg ggagggcgcc
      841 gccccagctg ccgccccgtc cttctcggag agggagctgc ctcagccgcc ccccttgctg
      901 tcgccgcaga atgcccctca cgtcgccctg ggcccccatc tcaggccccc cttcctgggg
      961 gtgccctcgg ctctgtgcca gaccccaggc tacggcttcc tgccccccgc gcaggcggag
     1021 atgttcgccc ggcagcagga gctcctgcgg aagcagaacc tggcccggct ggagctgccc
     1081 gccgacctcc tgcggcagaa ggagctggag agcgcgcgcc cacagctgct ggcgcccgag
     1141 accgccctgc gccccaacga cggcgccgag gagctgcagc ggcgcggggc cctgctggtg
     1201 ctgaaccacg gcgcggcgcc actgctggcc ctgccccccc aggggccccc gggctccgga
     1261 ccccccaccc cgtcccggga ctctgcccgg cgagcccccc ggaagggggg tcccggccct
     1321 gcctcagcgc ggcccagcga gtccaaggag atgacggggg ctaggctctg ggcacaagat
     1381 ggctcggaag acgagccccc caaagactcg gacggagagg accccgagac ggcagctgtt
     1441 gggtgcaggg ggcccactcc gggccaagct ccagctggag gggccggcgc cgaggggaag
     1501 gggcttttcc cagggtccac actgcccctg ggcttccctt atgccgtcag cccctacttc
     1561 cacacaggcg cggtaggggg actctccatg gatggggagg aagccccagc ccctgaggac
     1621 gtcaccaagt ggaccgtgga tgacgtctgc agcttccccg tggctctgcc actgcagcca
     1681 ccaaccctgc gggccccgga gcgagaactc ggcacaggag agcagccctt gtcccccacg
     1741 acggccacgt ccccctatgg agggggccac gcccttgccg gtcaaacttc acccaagcag
     1801 gagaatggga ccttggctct acttccaggg gcccccgacc cttcccagcc tctgtgttga
//