LOCUS JX093072 1671 bp mRNA linear HUM 08-AUG-2012 DEFINITION Homo sapiens sterile alpha motif domain containing 11 splice variant ASV7 (SAMD11) mRNA, complete cds, alternatively spliced. ACCESSION JX093072 VERSION JX093072.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1671) AUTHORS Jin,G.J. and Shen,H. TITLE Identification and expression analysis of novel alternative splice variants of SAMD11 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1671) AUTHORS Jin,G.J. and Shen,H. TITLE Direct Submission JOURNAL Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie Road, Guangzhou, Guangdang 510060, China COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.10 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1671 /db_xref="H-InvDB:HIT000721887" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..1671 /gene="SAMD11" CDS 1..1671 /gene="SAMD11" /note="alternatively spliced" /codon_start=1 /product="sterile alpha motif domain containing 11 splice variant ASV7" /protein_id="AFP36423.1" /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRSQDGNLPTLISSVHRSRH LVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSDCFSEKRARSESPQAEAL LLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSHGYGFLPPAQAEMFAR QQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLN HGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQD GSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSP YFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETL PLLTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVALPLQPPTLRAPERELG TGEQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC" BASE COUNT 288 a 590 c 560 g 233 t ORIGIN 1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata 61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc 121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg 181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt 241 atcatgaaga gaagccagga cggcaacctt cccaccctca tatccagcgt ccaccgcagc 301 cgccacctcg ttatgcccga gcatcagagc cgctgtgaat tccagagagg cagcctggag 361 attggcctgc gacccgccgg tgacctgttg ggcaagaggc tgggccgctc cccccgtatc 421 agcagcgact gcttttcaga gaagagggca cgaagcgaat cgcctcaagc agaggcgctg 481 ctgctgccgc gggagctggg gcccagcatg gccccggagg accattaccg ccggcttgtg 541 tcagcactga gcgaggccag cacctttgag gaccctcagc gcctctacca cctgggcctc 601 cccagccacg gctacggctt cctgcccccc gcgcaggcgg agatgttcgc ccggcagcag 661 gagctcctgc ggaagcagaa cctggcccgg ctggagctgc ccgccgacct cctgcggcag 721 aaggagctgg agagcgcgcg cccacagctg ctggcgcccg agaccgccct gcgccccaac 781 gacggcgccg aggagctgca gcggcgcggg gccctgctgg tgctgaacca cggcgcggcg 841 ccactgctgg ccctgccccc ccaggggccc ccgggctccg gaccccccac cccgtcccgg 901 gactctgccc ggcgagcccc ccggaagggg ggtcccggcc ctgcctcagc gcggcccagc 961 gagtccaagg agatgacggg ggctaggctc tgggcacaag atggctcgga agacgagccc 1021 cccaaagact cggacggaga ggaccccgag acggcagctg ttgggtgcag ggggcccact 1081 ccgggccaag ctccagctgg aggggccggc gccgagggga aggggctttt cccagggtcc 1141 acactgcccc tgggcttccc ttatgccgtc agcccctact tccacacagg cgcggtaggg 1201 ggactctcca tggatgggga ggaggcccca gcccctgagg acgtcaccaa gtggaccgtg 1261 gatgacgtct gcagcttcgt ggggggcctg tctggctgtg gagagtacac tcgggtcttc 1321 agggagcagg ggatcgacgg ggagaccctg ccactgctga cggaggagca cctgctgacc 1381 aacatggggc tgaagctggg gcccgccctc aagatccggg cccaggtggc caggcgcctg 1441 ggccgagttt tctacgtggc cagcttcccc gtggctctgc cactgcagcc accaaccctg 1501 cgggccccgg agcgagaact cggcacagga gagcagccct tgtcccccac gacggccacg 1561 tccccctatg gagggggcca cgcccttgcc ggtcaaactt cacccaagca ggagaatggg 1621 accttggctc tacttccagg ggcccccgac ccttcccagc ctctgtgttg a //