LOCUS       JX093069                1873 bp    mRNA    linear   HUM 08-AUG-2012
DEFINITION  Homo sapiens sterile alpha motif domain containing 11 splice
            variant ASV4 (SAMD11) mRNA, partial cds, alternatively spliced.
ACCESSION   JX093069
VERSION     JX093069.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Identification and expression analysis of novel alternative splice
            variants of SAMD11
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Jin,G.J. and Shen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology,
            Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie
            Road, Guangzhou, Guangdang 510060, China
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: DNAstar v. 7.10
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /db_xref="H-InvDB:HIT000721884"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     gene            1..>1873
                     /gene="SAMD11"
     CDS             1..>1873
                     /gene="SAMD11"
                     /note="alternatively spliced"
                     /codon_start=1
                     /product="sterile alpha motif domain containing 11 splice
                     variant ASV4"
                     /protein_id="AFP36420.1"
                     /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK
                     KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS
                     QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD
                     CFSEKRARSESPQEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPS
                     HDLLRVRQEVAAAALRGPSGLKAHLPSSTAGQRRKQGLAQHREGAAPAAAPSFSEREL
                     PQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQELLRK
                     QNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLNHGAAPLL
                     ALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQDGSEDEPP
                     KDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSPYFHTGLQ
                     GAGDRRGDPATADGGAPADQHGAEAGARPQDPGPGGQAPGPSFLRGQLPRGSATAATN
                     PAGPGARTRHRRAALVPHDGHVPLWRGPRPCRSNFTQAGEWDLGSTSRGPRPFPASVL
                     "
BASE COUNT          312 a          688 c          610 g          263 t
ORIGIN      
        1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata
       61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc
      121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg
      181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt
      241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc
      301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc
      361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg
      421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac
      481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag aggcgctgct gctgccgcgg
      541 gagctggggc ccagcatggc cccggaggac cattaccgcc ggcttgtgtc agcactgagc
      601 gaggccagca cctttgagga ccctcagcgc ctctaccacc tgggcctccc cagccacgat
      661 ctcctgaggg tccggcagga ggtggcggct gcagctctga ggggccccag tggcctgaaa
      721 gcccacctgc cctcctccac ggcaggtcag cgtcggaagc agggcctggc tcagcaccgg
      781 gagggcgccg ccccagctgc cgccccgtcc ttctcggaga gggagctgcc tcagccgccc
      841 cccttgctgt cgccgcagaa tgcccctcac gtcgccctgg gcccccatct caggcccccc
      901 ttcctggggg tgccctcggc tctgtgccag accccaggct acggcttcct gccccccgcg
      961 caggcggaga tgttcgcccg gcagcaggag ctcctgcgga agcagaacct ggcccggctg
     1021 gagctgcccg ccgacctcct gcggcagaag gagctggaga gcgcgcgccc acagctgctg
     1081 gcgcccgaga ccgccctgcg ccccaacgac ggcgccgagg agctgcagcg gcgcggggcc
     1141 ctgctggtgc tgaaccacgg cgcggcgcca ctgctggccc tgccccccca ggggcccccg
     1201 ggctccggac cccccacccc gtcccgggac tctgcccggc gagccccccg gaaggggggt
     1261 cccggccctg cctcagcgcg gcccagcgag tccaaggaga tgacgggggc taggctctgg
     1321 gcacaagatg gctcggaaga cgagcccccc aaagactcgg acggagagga ccccgagacg
     1381 gcagctgttg ggtgcagggg gcccactccg ggccaagctc cagctggagg ggccggcgcc
     1441 gaggggaagg ggcttttccc agggtccaca ctgcccctgg gcttccctta tgccgtcagc
     1501 ccctacttcc acacaggtct tcagggagca ggggatcgac ggggagaccc tgccactgct
     1561 gacggaggag cacctgctga ccaacatggg gctgaagctg gggcccgccc tcaagatccg
     1621 ggcccaggtg gccaggcgcc tgggccgagt tttctacgtg gccagcttcc ccgtggctct
     1681 gccactgcag ccaccaaccc tgcgggcccc ggagcgagaa ctcggcacag gagagcagcc
     1741 cttgtccccc acgacggcca cgtcccccta tggagggggc cacgcccttg ccggtcaaac
     1801 ttcacccaag caggagaatg ggaccttggc tctacttcca ggggcccccg acccttccca
     1861 gcctctgtgt tga
//