LOCUS JX093069 1873 bp mRNA linear HUM 08-AUG-2012 DEFINITION Homo sapiens sterile alpha motif domain containing 11 splice variant ASV4 (SAMD11) mRNA, partial cds, alternatively spliced. ACCESSION JX093069 VERSION JX093069.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1873) AUTHORS Jin,G.J. and Shen,H. TITLE Identification and expression analysis of novel alternative splice variants of SAMD11 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1873) AUTHORS Jin,G.J. and Shen,H. TITLE Direct Submission JOURNAL Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie Road, Guangzhou, Guangdang 510060, China COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.10 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1873 /db_xref="H-InvDB:HIT000721884" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..>1873 /gene="SAMD11" CDS 1..>1873 /gene="SAMD11" /note="alternatively spliced" /codon_start=1 /product="sterile alpha motif domain containing 11 splice variant ASV4" /protein_id="AFP36420.1" /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD CFSEKRARSESPQEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPS HDLLRVRQEVAAAALRGPSGLKAHLPSSTAGQRRKQGLAQHREGAAPAAAPSFSEREL PQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQELLRK QNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLVLNHGAAPLL ALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQDGSEDEPP KDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSPYFHTGLQ GAGDRRGDPATADGGAPADQHGAEAGARPQDPGPGGQAPGPSFLRGQLPRGSATAATN PAGPGARTRHRRAALVPHDGHVPLWRGPRPCRSNFTQAGEWDLGSTSRGPRPFPASVL " BASE COUNT 312 a 688 c 610 g 263 t ORIGIN 1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata 61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc 121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg 181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt 241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc 301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc 361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg 421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac 481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag aggcgctgct gctgccgcgg 541 gagctggggc ccagcatggc cccggaggac cattaccgcc ggcttgtgtc agcactgagc 601 gaggccagca cctttgagga ccctcagcgc ctctaccacc tgggcctccc cagccacgat 661 ctcctgaggg tccggcagga ggtggcggct gcagctctga ggggccccag tggcctgaaa 721 gcccacctgc cctcctccac ggcaggtcag cgtcggaagc agggcctggc tcagcaccgg 781 gagggcgccg ccccagctgc cgccccgtcc ttctcggaga gggagctgcc tcagccgccc 841 cccttgctgt cgccgcagaa tgcccctcac gtcgccctgg gcccccatct caggcccccc 901 ttcctggggg tgccctcggc tctgtgccag accccaggct acggcttcct gccccccgcg 961 caggcggaga tgttcgcccg gcagcaggag ctcctgcgga agcagaacct ggcccggctg 1021 gagctgcccg ccgacctcct gcggcagaag gagctggaga gcgcgcgccc acagctgctg 1081 gcgcccgaga ccgccctgcg ccccaacgac ggcgccgagg agctgcagcg gcgcggggcc 1141 ctgctggtgc tgaaccacgg cgcggcgcca ctgctggccc tgccccccca ggggcccccg 1201 ggctccggac cccccacccc gtcccgggac tctgcccggc gagccccccg gaaggggggt 1261 cccggccctg cctcagcgcg gcccagcgag tccaaggaga tgacgggggc taggctctgg 1321 gcacaagatg gctcggaaga cgagcccccc aaagactcgg acggagagga ccccgagacg 1381 gcagctgttg ggtgcagggg gcccactccg ggccaagctc cagctggagg ggccggcgcc 1441 gaggggaagg ggcttttccc agggtccaca ctgcccctgg gcttccctta tgccgtcagc 1501 ccctacttcc acacaggtct tcagggagca ggggatcgac ggggagaccc tgccactgct 1561 gacggaggag cacctgctga ccaacatggg gctgaagctg gggcccgccc tcaagatccg 1621 ggcccaggtg gccaggcgcc tgggccgagt tttctacgtg gccagcttcc ccgtggctct 1681 gccactgcag ccaccaaccc tgcgggcccc ggagcgagaa ctcggcacag gagagcagcc 1741 cttgtccccc acgacggcca cgtcccccta tggagggggc cacgcccttg ccggtcaaac 1801 ttcacccaag caggagaatg ggaccttggc tctacttcca ggggcccccg acccttccca 1861 gcctctgtgt tga //