LOCUS JX093068 2049 bp mRNA linear HUM 08-AUG-2012 DEFINITION Homo sapiens sterile alpha motif domain containing 11 splice variant ASV3 (SAMD11) mRNA, complete cds, alternatively spliced. ACCESSION JX093068 VERSION JX093068.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2049) AUTHORS Jin,G.J. and Shen,H. TITLE Identification and expression analysis of novel alternative splice variants of SAMD11 JOURNAL Unpublished REFERENCE 2 (bases 1 to 2049) AUTHORS Jin,G.J. and Shen,H. TITLE Direct Submission JOURNAL Submitted (21-MAY-2012) State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, 54 Xianlie Road, Guangzhou, Guangdang 510060, China COMMENT ##Assembly-Data-START## Assembly Method :: DNAstar v. 7.10 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2049 /db_xref="H-InvDB:HIT000721883" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..2049 /gene="SAMD11" CDS 1..2049 /gene="SAMD11" /note="alternatively spliced" /codon_start=1 /product="sterile alpha motif domain containing 11 splice variant ASV3" /protein_id="AFP36419.1" /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLK KERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCS QDGNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSD CFSEKRARSESPQAEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLP SHGEDPPWHDPPHHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQH REGAAPAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFL PPAQAEMFARQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEEL QRRGALLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKE MTGARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTL PLGFPYAVSPYFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVF REQGIDGETLPLLTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVALPLQPP TLRAPERELGTGEQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC " BASE COUNT 341 a 744 c 672 g 292 t ORIGIN 1 atgtccaagg ggatcctgca ggtgcatcct ccgatctgcg actgcccggg ctgccgaata 61 tcctccccgg tgaaccgggg gcggctggca gacaagagga cagtcgccct gcctgccgcc 121 cggaacctga agaaggagcg aactcccagc ttctctgcca gcgatggtga cagcgacggg 181 agtggcccca cctgtgggcg gcggccaggc ttgaagcagg aggatggtcc gcacatccgt 241 atcatgaaga gaagagtcca cacccactgg gacgtgaaca tctctttccg agaggcgtcc 301 tgcagccagg acggcaacct tcccaccctc atatccagcg tccaccgcag ccgccacctc 361 gttatgcccg agcatcagag ccgctgtgaa ttccagagag gcagcctgga gattggcctg 421 cgacccgccg gtgacctgtt gggcaagagg ctgggccgct ccccccgtat cagcagcgac 481 tgcttttcag agaagagggc acgaagcgaa tcgcctcaag cagaggcgct gctgctgccg 541 cgggagctgg ggcccagcat ggccccggag gaccattacc gccggcttgt gtcagcactg 601 agcgaggcca gcacctttga ggaccctcag cgcctctacc acctgggcct ccccagccac 661 ggtgaggacc caccctggca tgatccccct catcacctcc ccagccacga tctcctgagg 721 gtccggcagg aggtggcggc tgcagctctg aggggcccca gtggcctgga agcccacctg 781 ccctcctcca cggcaggtca gcgtcggaag cagggcctgg ctcagcaccg ggagggcgcc 841 gccccagctg ccgccccgtc cttctcggag agggagctgc ctcagccgcc ccccttgctg 901 tcgccgcaga atgcccctca cgtcgccctg ggcccccatc tcaggccccc cttcctgggg 961 gtgccctcgg ctctgtgcca gaccccaggc tacggcttcc tgccccccgc gcaggcggag 1021 atgttcgccc ggcagcagga gctcctgcgg aagcagaacc tggcccggct ggagctgccc 1081 gccgacctcc tgcggcagaa ggagctggag agcgcgcgcc cacagctgct ggcgcccgag 1141 accgccctgc gccccaacga cggcgccgag gagctgcagc ggcgcggggc cctgctggtg 1201 ctgaaccacg gcgcggcgcc actgctggcc ctgccccccc aggggccccc gggctccgga 1261 ccccccaccc cgtcccggga ctctgcccgg cgagcccccc ggaagggggg tcccggccct 1321 gcctcagcgc ggcccagcga gtccaaggag atgacggggg ctaggctctg ggcacaagat 1381 ggctcggaag acgagccccc caaagactcg gacggagagg accccgagac ggcagctgtt 1441 gggtgcaggg ggcccactcc gggccaagct ccagctggag gggccggcgc cgaggggaag 1501 gggcttttcc cagggtccac actgcccctg ggcttccctt atgccgtcag cccctacttc 1561 cacacaggcg cggtaggggg actctccatg gatggggagg aggccccagc ccctgaggac 1621 gtcaccaagt ggaccgtgga tgacgtctgc agcttcgtgg ggggcctgtc tggctgtgga 1681 gagtacactc gggtcttcag ggagcagggg atcgacgggg agaccctgcc actgctgacg 1741 gaggagcacc tgctgaccaa catggggctg aagctggggc ccgccctcaa gatccgggcc 1801 caggtggcca ggcgcctggg ccgagttttc tacgtggcca gcttccccgt ggctctgcca 1861 ctgcagccac caaccctgcg ggccccggag cgagaactcg gcacaggaga gcagcccttg 1921 tcccccacga cggccacgtc cccctatgga gggggccacg cccttgccgg tcaaacttca 1981 cccaagcagg agaatgggac cttggctcta cttccagggg cccccgaccc ttcccagcct 2041 ctgtgttga //