LOCUS       JQ954696                1914 bp    mRNA    linear   HUM 09-SEP-2012
DEFINITION  Homo sapiens Best1V1Delta2 mRNA, complete cds, alternatively
            spliced.
ACCESSION   JQ954696
VERSION     JQ954696.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Kuo,Y.-H., Abdullayev,I.F. and Mongin,A.A.
  TITLE     Effects of Alternative Splicing on Bestrophin-1 Calcium-Activated
            Chloride Channel Function
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Kuo,Y.-H., Abdullayev,I.F. and Mongin,A.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2012) Neurosurgery, Albany Medical Center, 43 New
            Scotland Avenue, MC 10, Albany, NY 12208, USA
FEATURES             Location/Qualifiers
     source          1..1914
                     /db_xref="H-InvDB:HIT000721753"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /cell_type="glia"
                     /tissue_type="glioma"
     CDS             247..1824
                     /note="variant 1; lacks exon 2 encoding the
                     amino-terminus; alternatively spliced"
                     /codon_start=1
                     /product="Best1V1Delta2"
                     /protein_id="AFR11385.1"
                     /translation="MFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPD
                     RLMSLVSGFVEGKDERGRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQAGF
                     MTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQ
                     CGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDPVVPVFTF
                     LQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDM
                     YWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAGIIGRFL
                     GLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKAVDA
                     FKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHSVTGIDTKDKSLKTVSSGAK
                     KSSELLSESDGALMEHPEVSQVRRKTVEFNLTDMPEIPENHLKEPLEQSPTNIHTTLK
                     DHMDPYWALENRDEAHS"
BASE COUNT          457 a          565 c          506 g          386 t
ORIGIN      
        1 gccgttgctt ctgagcagat tacaagaagg gactaagaca aggactcctt tgtggaggtc
       61 ctggcttagg gagtcaagtg acggcggctc agcactcacg tgggcagtgc cagcctctaa
      121 gagtgggcag gggcactggc cacagagtcc cagggagtcc caccagccta gtcgccagac
      181 cttctgtggg atcatcggac ccacctggaa ccccacctgc tggccctcac ggaagaacaa
      241 cagctgatgt ttgagaaact gactctgtat tgcgacagct acatccagct catccccatt
      301 tccttcgtgc tgggcttcta cgtgacgctg gtcgtgaccc gctggtggaa ccagtacgag
      361 aacctgccgt ggcccgaccg cctcatgagc ctggtgtcgg gcttcgtcga aggcaaggac
      421 gagcgaggcc ggctgctgcg gcgcacgctc atccgctacg ccaacctggg caacgtgctc
      481 atcctgcgca gcgtcagcac cgcagtctac aagcgcttcc ccagcgccca gcacctggtg
      541 caagcaggct ttatgactcc ggcagaacac aagcagttgg agaaactgag cctaccacac
      601 aacatgttct gggtgccctg ggtgtggttt gccaacctgt caatgaaggc gtggcttgga
      661 ggtcgaatcc gggaccctat cctgctccag agcctgctga acgagatgaa caccttgcgt
      721 actcagtgtg gacacctgta tgcctacgac tggattagta tcccactggt gtatacacag
      781 gtggtgactg tggcggtgta cagcttcttc ctgacttgtc tagttgggcg gcagtttctg
      841 aacccagcca aggcctaccc tggccatgag ctggaccccg ttgtgcccgt cttcacgttc
      901 ctgcagttct tcttctatgt tggctggctg aaggtggcag agcagctcat caaccccttt
      961 ggagaggatg atgatgattt tgagaccaac tggattgtcg acaggaattt gcaggtgtcc
     1021 ctgttggctg tggatgagat gcaccaggac ctgcctcgga tggagccgga catgtactgg
     1081 aataagcccg agccacagcc cccctacaca gctgcttccg cccagttccg tcgagcctcc
     1141 tttatgggct ccaccttcaa catcagcctg aacaaagagg agatggagtt ccagcccaat
     1201 caggaggacg aggaggatgc tcacgctggc atcattggcc gcttcctagg cctgcagtcc
     1261 catgatcacc atcctcccag ggcaaactca aggaccaaac tactgtggcc caagagggaa
     1321 tcccttctcc acgagggcct gcccaaaaac cacaaggcag ccaaacagaa cgttaggggc
     1381 caggaagaca acaaggcctg gaagcttaag gctgtggacg ccttcaagtc tgccccactg
     1441 tatcagaggc caggctacta cagtgcccca cagacacccc tcagccccac tcccatgttc
     1501 ttccccctag aaccatcagc gccgtcaaag cttcacagtg tcacaggcat agacaccaaa
     1561 gacaaaagct taaagactgt gagttctggg gccaagaaaa gttctgaatt gctctcagag
     1621 agcgatgggg ccttgatgga gcacccagaa gtatctcaag tgaggaggaa aactgtggag
     1681 tttaacctga cggatatgcc agagatcccc gaaaatcacc tcaaagaacc tttggaacaa
     1741 tcaccaacca acatacacac tacactcaaa gatcacatgg atccttattg ggccttggaa
     1801 aacagggatg aagcacattc ctaacctgct tcctaatggg gatgcttcgc cagccaggtc
     1861 ctcacctgtg tgtacaccag caggacactg atccagtcac agccatacag ctgt
//