LOCUS JQ954696 1914 bp mRNA linear HUM 09-SEP-2012 DEFINITION Homo sapiens Best1V1Delta2 mRNA, complete cds, alternatively spliced. ACCESSION JQ954696 VERSION JQ954696.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1914) AUTHORS Kuo,Y.-H., Abdullayev,I.F. and Mongin,A.A. TITLE Effects of Alternative Splicing on Bestrophin-1 Calcium-Activated Chloride Channel Function JOURNAL Unpublished REFERENCE 2 (bases 1 to 1914) AUTHORS Kuo,Y.-H., Abdullayev,I.F. and Mongin,A.A. TITLE Direct Submission JOURNAL Submitted (19-APR-2012) Neurosurgery, Albany Medical Center, 43 New Scotland Avenue, MC 10, Albany, NY 12208, USA FEATURES Location/Qualifiers source 1..1914 /db_xref="H-InvDB:HIT000721753" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_type="glia" /tissue_type="glioma" CDS 247..1824 /note="variant 1; lacks exon 2 encoding the amino-terminus; alternatively spliced" /codon_start=1 /product="Best1V1Delta2" /protein_id="AFR11385.1" /translation="MFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPD RLMSLVSGFVEGKDERGRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQAGF MTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQ CGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDPVVPVFTF LQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDM YWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAGIIGRFL GLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKAVDA FKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHSVTGIDTKDKSLKTVSSGAK KSSELLSESDGALMEHPEVSQVRRKTVEFNLTDMPEIPENHLKEPLEQSPTNIHTTLK DHMDPYWALENRDEAHS" BASE COUNT 457 a 565 c 506 g 386 t ORIGIN 1 gccgttgctt ctgagcagat tacaagaagg gactaagaca aggactcctt tgtggaggtc 61 ctggcttagg gagtcaagtg acggcggctc agcactcacg tgggcagtgc cagcctctaa 121 gagtgggcag gggcactggc cacagagtcc cagggagtcc caccagccta gtcgccagac 181 cttctgtggg atcatcggac ccacctggaa ccccacctgc tggccctcac ggaagaacaa 241 cagctgatgt ttgagaaact gactctgtat tgcgacagct acatccagct catccccatt 301 tccttcgtgc tgggcttcta cgtgacgctg gtcgtgaccc gctggtggaa ccagtacgag 361 aacctgccgt ggcccgaccg cctcatgagc ctggtgtcgg gcttcgtcga aggcaaggac 421 gagcgaggcc ggctgctgcg gcgcacgctc atccgctacg ccaacctggg caacgtgctc 481 atcctgcgca gcgtcagcac cgcagtctac aagcgcttcc ccagcgccca gcacctggtg 541 caagcaggct ttatgactcc ggcagaacac aagcagttgg agaaactgag cctaccacac 601 aacatgttct gggtgccctg ggtgtggttt gccaacctgt caatgaaggc gtggcttgga 661 ggtcgaatcc gggaccctat cctgctccag agcctgctga acgagatgaa caccttgcgt 721 actcagtgtg gacacctgta tgcctacgac tggattagta tcccactggt gtatacacag 781 gtggtgactg tggcggtgta cagcttcttc ctgacttgtc tagttgggcg gcagtttctg 841 aacccagcca aggcctaccc tggccatgag ctggaccccg ttgtgcccgt cttcacgttc 901 ctgcagttct tcttctatgt tggctggctg aaggtggcag agcagctcat caaccccttt 961 ggagaggatg atgatgattt tgagaccaac tggattgtcg acaggaattt gcaggtgtcc 1021 ctgttggctg tggatgagat gcaccaggac ctgcctcgga tggagccgga catgtactgg 1081 aataagcccg agccacagcc cccctacaca gctgcttccg cccagttccg tcgagcctcc 1141 tttatgggct ccaccttcaa catcagcctg aacaaagagg agatggagtt ccagcccaat 1201 caggaggacg aggaggatgc tcacgctggc atcattggcc gcttcctagg cctgcagtcc 1261 catgatcacc atcctcccag ggcaaactca aggaccaaac tactgtggcc caagagggaa 1321 tcccttctcc acgagggcct gcccaaaaac cacaaggcag ccaaacagaa cgttaggggc 1381 caggaagaca acaaggcctg gaagcttaag gctgtggacg ccttcaagtc tgccccactg 1441 tatcagaggc caggctacta cagtgcccca cagacacccc tcagccccac tcccatgttc 1501 ttccccctag aaccatcagc gccgtcaaag cttcacagtg tcacaggcat agacaccaaa 1561 gacaaaagct taaagactgt gagttctggg gccaagaaaa gttctgaatt gctctcagag 1621 agcgatgggg ccttgatgga gcacccagaa gtatctcaag tgaggaggaa aactgtggag 1681 tttaacctga cggatatgcc agagatcccc gaaaatcacc tcaaagaacc tttggaacaa 1741 tcaccaacca acatacacac tacactcaaa gatcacatgg atccttattg ggccttggaa 1801 aacagggatg aagcacattc ctaacctgct tcctaatggg gatgcttcgc cagccaggtc 1861 ctcacctgtg tgtacaccag caggacactg atccagtcac agccatacag ctgt //