LOCUS JQ918353 733 bp mRNA linear HUM 19-JAN-2013 DEFINITION Homo sapiens ATG5 variant 2 (ATG5) mRNA, complete cds. ACCESSION JQ918353 VERSION JQ918353.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 733) AUTHORS Ouyang,D.-Y., Xu,L.-H. and He,X.-H. TITLE Cloning of cDNA of autophagy-related genes from human prostate cancer cell lines JOURNAL Unpublished REFERENCE 2 (bases 1 to 733) AUTHORS Ouyang,D.-Y., Xu,L.-H. and He,X.-H. TITLE Direct Submission JOURNAL Submitted (11-APR-2012) Department of Immunobiology, Jinan University, 601 Huangpu Dadao West, Guangzhou, Guangdong 510632, China FEATURES Location/Qualifiers source 1..733 /db_xref="H-InvDB:HIT000721715" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="DU145" /cell_type="prostate cancer" /PCR_primers="fwd_seq: atgacagatgacaaagatgtgcttcg, rev_seq: tcaatctgttggctgtgggatgatac" gene 1..733 /gene="ATG5" CDS 1..489 /gene="ATG5" /note="similar to S. cerevisiae ATG5 autophagy related 5" /codon_start=1 /product="ATG5 variant 2" /protein_id="AGC52701.1" /translation="MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSY LTLVTDKVKKHFQKVMRQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITV HFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQND ND" BASE COUNT 242 a 130 c 157 g 204 t ORIGIN 1 atgacagatg acaaagatgt gcttcgagat gtgtggtttg gacgaattcc aacttgtttc 61 acgctatatc aggatgagat aactgaaagg gaagcagaac catactattt gcttttgcca 121 agagtaagtt atttgacgtt ggtaactgac aaagtgaaaa agcactttca gaaggttatg 181 agacaagaag acattagtga gatatggttt gaatatgaag gcacaccact gaaatggcat 241 tatccaattg gtttgctatt tgatcttctt gcatcaagtt cagctcttcc ttggaacatc 301 acagtacatt ttaagagttt tccagaaaaa gaccttctgc actgtccatc taaggatgca 361 attgaagctc attttatgtc atgtatgaaa gaagctgatg ctttaaaaca taaaagtcaa 421 gtaatcaatg aaatgcagaa aaaagatcac aagcaactct ggatgggatt gcaaaatgac 481 aacgactgaa agacctttca ttcagaagct gtttcgtcct gtggctgcag atggacagtt 541 gcacacacta ggagatctcc tcaaagaagt ttgtccttct gctattgatc ctgaagatgg 601 ggaaaaaaag aatcaagtga tgattcatgg aattgagcca atgttggaaa cacctctgca 661 gtggctgagt gaacatctga gctacccgga taattttctt catattagta tcatcccaca 721 gccaacagat tga //