LOCUS       JQ918353                 733 bp    mRNA    linear   HUM 19-JAN-2013
DEFINITION  Homo sapiens ATG5 variant 2 (ATG5) mRNA, complete cds.
ACCESSION   JQ918353
VERSION     JQ918353.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Ouyang,D.-Y., Xu,L.-H. and He,X.-H.
  TITLE     Cloning of cDNA of autophagy-related genes from human prostate
            cancer cell lines
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 733)
  AUTHORS   Ouyang,D.-Y., Xu,L.-H. and He,X.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Department of Immunobiology, Jinan
            University, 601 Huangpu Dadao West, Guangzhou, Guangdong 510632,
            China
FEATURES             Location/Qualifiers
     source          1..733
                     /db_xref="H-InvDB:HIT000721715"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /cell_line="DU145"
                     /cell_type="prostate cancer"
                     /PCR_primers="fwd_seq: atgacagatgacaaagatgtgcttcg,
                     rev_seq: tcaatctgttggctgtgggatgatac"
     gene            1..733
                     /gene="ATG5"
     CDS             1..489
                     /gene="ATG5"
                     /note="similar to S. cerevisiae ATG5 autophagy related 5"
                     /codon_start=1
                     /product="ATG5 variant 2"
                     /protein_id="AGC52701.1"
                     /translation="MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSY
                     LTLVTDKVKKHFQKVMRQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITV
                     HFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQND
                     ND"
BASE COUNT          242 a          130 c          157 g          204 t
ORIGIN      
        1 atgacagatg acaaagatgt gcttcgagat gtgtggtttg gacgaattcc aacttgtttc
       61 acgctatatc aggatgagat aactgaaagg gaagcagaac catactattt gcttttgcca
      121 agagtaagtt atttgacgtt ggtaactgac aaagtgaaaa agcactttca gaaggttatg
      181 agacaagaag acattagtga gatatggttt gaatatgaag gcacaccact gaaatggcat
      241 tatccaattg gtttgctatt tgatcttctt gcatcaagtt cagctcttcc ttggaacatc
      301 acagtacatt ttaagagttt tccagaaaaa gaccttctgc actgtccatc taaggatgca
      361 attgaagctc attttatgtc atgtatgaaa gaagctgatg ctttaaaaca taaaagtcaa
      421 gtaatcaatg aaatgcagaa aaaagatcac aagcaactct ggatgggatt gcaaaatgac
      481 aacgactgaa agacctttca ttcagaagct gtttcgtcct gtggctgcag atggacagtt
      541 gcacacacta ggagatctcc tcaaagaagt ttgtccttct gctattgatc ctgaagatgg
      601 ggaaaaaaag aatcaagtga tgattcatgg aattgagcca atgttggaaa cacctctgca
      661 gtggctgagt gaacatctga gctacccgga taattttctt catattagta tcatcccaca
      721 gccaacagat tga
//