LOCUS JQ728550 1945 bp mRNA linear HUM 16-JUN-2015
DEFINITION Homo sapiens LOX-5 splice variant (ALOX5) mRNA, complete cds,
alternatively spliced.
ACCESSION JQ728550
VERSION JQ728550.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1945)
AUTHORS Singh,A.K., Kumar,R., Shukla,A.A., Hariprasad,G., Chauhan,S.S. and
Dey,S.
TITLE Identification and molecular characterization of a novel splice
variant of human 5- lipoxygenase gene
JOURNAL Mol. Biol. Rep. 41 (12), 8255-8260 (2014)
PUBMED 25218842
REFERENCE 2 (bases 1 to 1945)
AUTHORS Singh,A.K., Kumar,R., Shukla,A.N., Singh,R., Hariprasad,G.,
Chauhan,S.S. and Dey,S.
TITLE A new splice variant of human LOX-5 gene encodes 139 amino acids
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1945)
AUTHORS Singh,A.K., Kumar,R., Shukla,A.N., Singh,R., Hariprasad,G.,
Chauhan,S.S. and Dey,S.
TITLE Direct Submission
JOURNAL Submitted (29-FEB-2012) Biophysics, All India Institute of Medical
Sciences, Ansari Nagar, New Delhi, Delhi 110029, India
FEATURES Location/Qualifiers
source 1..1945
/db_xref="H-InvDB:HIT000721456"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/PCR_primers="fwd_name: f1, fwd_seq:
cgaattcatgccctcctacacgg, rev_name: r2, rev_seq:
gtctagagtgtgctcagatggc"
gene 1..1945
/gene="ALOX5"
CDS 1..420
/gene="ALOX5"
/note="alternatively spliced"
/codon_start=1
/product="LOX-5 splice variant"
/protein_id="AFH78150.1"
/translation="MPSYTVTVATGSQWFAGTDDYIYLSLVGSAGCSEKHLLDKPFYN
DFERGAVDSYDVTVDEELGEIQLVRIEKRKYWLNDDWYLKYITLKTPHGDYIEFPCYR
WITGDVEVVLRDGRAMDGVEPWLPLEHRCQMPQGFTP"
BASE COUNT 433 a 564 c 552 g 396 t
ORIGIN
1 atgccctcct acacggtcac cgtggccact ggcagccagt ggttcgccgg cactgacgac
61 tacatctacc tcagcctcgt gggctcggcg ggctgcagcg agaagcacct gctggacaag
121 cccttctaca acgacttcga gcgtggcgcg gtggattcat acgacgtgac tgtggacgag
181 gaactgggcg agatccagct ggtcagaatc gagaagcgca agtactggct gaatgacgac
241 tggtacctga agtacatcac gctgaagacg ccccacgggg actacatcga gttcccctgc
301 taccgctgga tcaccggcga tgtcgaggtt gtcctgaggg atggacgcgc gatggatgga
361 gtggaaccct ggcttcccct tgagcatcga tgccaaatgc cacaaggatt taccccgtga
421 tatccagttt gatagtgaaa aaggagtgga ctttgttctg aattactcca aagcgatgga
481 gaacctgttc atcaaccgct tcatgcacat gttccagtct tcttggaatg acttcgccga
541 ctttgagaaa atctttgtca agatcagcaa cactatttct gagcgggtca tgaatcactg
601 gcaggaagac ctgatgtttg gctaccagtt cctgaatggc tgcaaccctg tgttgatccg
661 gcgctgcaca gagctgcccg agaagctccc ggtgaccacg gagatggtag agtgcagcct
721 ggagcggcag ctcagcttgg agcaggaggt ccagcaaggg aacattttca tcgtggactt
781 tgagctgctg gatggcatcg atgccaacaa aacagacccc tgcacactcc agttcctggc
841 cgctcccatc tgcttgctgt ataagaacct ggccaacaag attgtcccca ttgccatcca
901 gctcaaccaa atcccgggag atgagaaccc tattttcctc ccttcggatg caaaatacga
961 ctggcttttg gccaaaatct gggtgcgttc cagtgacttc cacgtccacc agaccatcac
1021 ccaccttctg cgaacacatc tggtgtctga ggtttttggc attgcaatgt accgccagct
1081 gcctgctgtg caccccattt tcaagctgct ggtggcacac gtgagattca ccattgcaat
1141 caacaccaag gcccgtgagc agctcatctg cgagtgtggc ctctttgaca aggccaacgc
1201 cacagggggc ggtgggcacg tgcagatggt gcagagggcc atgaaggacc tgacctatgc
1261 ctccctgtgc tttcccgagg ccatcaaggc ccggggcatg gagagcaaag aagacatccc
1321 ctactacttc taccgggacg acgggctcct ggtgtgggaa gccatcagga cgttcacggc
1381 cgaggtggta gacatctact acgagggcga ccaggtggtg gaggaggacc cggagctgca
1441 ggacttcgtg aacgatgtct acgtgtacgg catgcggggc cgcaagtcct caggcttccc
1501 caagtcggtc aagagccggg agcagctgtc ggagtacctg accgtggtga tcttcaccgc
1561 ctccgcccag cacgccgcgg tcaacttcgg ccagtacgac tggtgctcct ggatccccaa
1621 tgcgccccca accatgcgag ccccgccacc gactgccaag ggcgtggtga ccattgagca
1681 gatcgtggac acgctgcccg accgcggccg ctcctgctgg catctgggtg cagtgtgggc
1741 gctgagccag ttccaggaaa acgagctgtt cctgggcatg tacccagaag agcattttat
1801 cgagaagcct gtgaaggaag ccatggcccg attccgcaag aacctcgagg ccattgtcag
1861 cgtgattgct gagcgcaaca agaagaagca gctgccatat tactacttgt ccccagaccg
1921 gattccgaac agtgtggcca tctga
//