LOCUS JN663879 532 bp mRNA linear HUM 21-JUN-2013 DEFINITION Homo sapiens MAP1LC3B-a (MAP1LC3B) mRNA, complete cds, alternatively spliced. ACCESSION JN663879 VERSION JN663879.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 532) AUTHORS Liu,C., Ma,H., Wu,J., Huang,Q., Liu,J.O. and Yu,L. TITLE Arginine68 is an essential residue for the C-terminal cleavage of human Atg8 family proteins JOURNAL BMC Cell Biol. 14, 27 (2013) PUBMED 23721406 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 532) AUTHORS Liu,C. and Yu,L. TITLE Alternative splicing pattern analysis of human Atg8 family proteins JOURNAL Unpublished REFERENCE 3 (bases 1 to 532) AUTHORS Liu,C. and Yu,L. TITLE Direct Submission JOURNAL Submitted (10-SEP-2011) State Key Lab of Genetic Engineering, 220 Handan RD. Fudan University, Shanghai 200433, P. R. China FEATURES Location/Qualifiers source 1..532 /db_xref="H-InvDB:HIT000721213_02" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /PCR_primers="fwd_name: T-LC3B-up, fwd_seq: atcgccagagtcggattcgc, rev_name: T-LC3B-down, rev_seq: ctcctaggtgggaacactactgtttc" gene 1..532 /gene="MAP1LC3B" CDS 28..402 /gene="MAP1LC3B" /note="comparing to MAP1LC3B, MAP1LC3B-a lacks Arg68 due to the NAGNAG alternative splcing in intron 3; alternatively spliced" /codon_start=1 /product="MAP1LC3B-a" /protein_id="AEZ06292.1" /translation="MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQL PVLDKTKFLVPDHVNMSELIKIIRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEK DEDGFLYMVYASQETFGMKLSV" BASE COUNT 165 a 130 c 121 g 116 t ORIGIN 1 cgccgccgcc gcccagatcc ccgcaccatg ccgtcggaga agaccttcaa gcagcgccgc 61 accttcgaac aaagagtaga agatgtccga cttattcgag agcagcatcc aaccaaaatc 121 ccggtgataa tagaacgata caagggtgag aagcagcttc ctgttctgga taaaacaaag 181 ttccttgtac ctgaccatgt caacatgagt gagctcatca agataattag gcgcttacag 241 ctcaatgcta atcaggcctt cttcctgttg gtgaacggac acagcatggt cagcgtctcc 301 acaccaatct cagaggtgta tgagagtgag aaagatgaag atggattcct gtacatggtc 361 tatgcctccc aggagacgtt cgggatgaaa ttgtcagtgt aaaaccagaa aaaatgcatc 421 tcttctagaa ttgtttaaac ccttaccaag gaaaaaaaag gggtgttacc aactgagatc 481 gatcagttca tccaatcaca gatcatgaaa cagtagtgtt cccacctagg ag //