LOCUS       JN663879                 532 bp    mRNA    linear   HUM 21-JUN-2013
DEFINITION  Homo sapiens MAP1LC3B-a (MAP1LC3B) mRNA, complete cds,
            alternatively spliced.
ACCESSION   JN663879
VERSION     JN663879.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Liu,C., Ma,H., Wu,J., Huang,Q., Liu,J.O. and Yu,L.
  TITLE     Arginine68 is an essential residue for the C-terminal cleavage of
            human Atg8 family proteins
  JOURNAL   BMC Cell Biol. 14, 27 (2013)
   PUBMED   23721406
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 532)
  AUTHORS   Liu,C. and Yu,L.
  TITLE     Alternative splicing pattern analysis of human Atg8 family proteins
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 532)
  AUTHORS   Liu,C. and Yu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2011) State Key Lab of Genetic Engineering, 220
            Handan RD. Fudan University, Shanghai 200433, P. R. China
FEATURES             Location/Qualifiers
     source          1..532
                     /db_xref="H-InvDB:HIT000721213_02"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /PCR_primers="fwd_name: T-LC3B-up, fwd_seq:
                     atcgccagagtcggattcgc, rev_name: T-LC3B-down, rev_seq:
                     ctcctaggtgggaacactactgtttc"
     gene            1..532
                     /gene="MAP1LC3B"
     CDS             28..402
                     /gene="MAP1LC3B"
                     /note="comparing to MAP1LC3B, MAP1LC3B-a lacks Arg68 due
                     to the NAGNAG alternative splcing in intron 3;
                     alternatively spliced"
                     /codon_start=1
                     /product="MAP1LC3B-a"
                     /protein_id="AEZ06292.1"
                     /translation="MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQL
                     PVLDKTKFLVPDHVNMSELIKIIRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEK
                     DEDGFLYMVYASQETFGMKLSV"
BASE COUNT          165 a          130 c          121 g          116 t
ORIGIN      
        1 cgccgccgcc gcccagatcc ccgcaccatg ccgtcggaga agaccttcaa gcagcgccgc
       61 accttcgaac aaagagtaga agatgtccga cttattcgag agcagcatcc aaccaaaatc
      121 ccggtgataa tagaacgata caagggtgag aagcagcttc ctgttctgga taaaacaaag
      181 ttccttgtac ctgaccatgt caacatgagt gagctcatca agataattag gcgcttacag
      241 ctcaatgcta atcaggcctt cttcctgttg gtgaacggac acagcatggt cagcgtctcc
      301 acaccaatct cagaggtgta tgagagtgag aaagatgaag atggattcct gtacatggtc
      361 tatgcctccc aggagacgtt cgggatgaaa ttgtcagtgt aaaaccagaa aaaatgcatc
      421 tcttctagaa ttgtttaaac ccttaccaag gaaaaaaaag gggtgttacc aactgagatc
      481 gatcagttca tccaatcaca gatcatgaaa cagtagtgtt cccacctagg ag
//