LOCUS JN655166 2314 bp mRNA linear HUM 13-APR-2012
DEFINITION Homo sapiens TOX2 variant 5 mRNA, complete cds, alternatively
spliced.
ACCESSION JN655166
VERSION JN655166.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2314)
AUTHORS Tessema,M., Yingling,C.M., Grimes,M.J., Thomas,C.L., Liu,Y.,
Leng,S., Joste,N. and Belinsky,S.A.
TITLE Differential Epigenetic Regulation of TOX Subfamily High Mobility
Group Box Genes in Lung and Breast Cancers
JOURNAL PLoS ONE 7 (4), E34850 (2012)
PUBMED 22496870
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2314)
AUTHORS Tessema,M., Grimes,M.J. and Belinsky,S.A.
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2011) Lung Cancer Program, Lovelace Respiratory
Research Institute, 2425 Ridgecrest Drive SE, Albuquerque, NM
87108, USA
FEATURES Location/Qualifiers
source 1..2314
/db_xref="H-InvDB:HIT000721206"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 166..1218
/note="alternatively spliced"
/codon_start=1
/product="TOX2 variant 5"
/protein_id="AFA25746.1"
/translation="MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLG
DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHS
EVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS
PSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDT
QAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLV
SKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGASPASLART
LGSKSLLPGLRLPAHL"
BASE COUNT 532 a 760 c 601 g 421 t
ORIGIN
1 actgcccgcg ggagccgccg ccgccgccgc cgcgcccgcc atggacgtcc gcctgtaccc
61 ctcggcgccc gcggtgggcg cgcggcccgg ggccgagccg gccggcctgg cgcacctgga
121 ctattaccac ggcggcaagt tgatggtgac agtgcctacg tggggatgag tgacggaaac
181 ccagagctcc tgtcaaccag ccagacctac aacggccaga gcgagaacaa cgaagactat
241 gagatccccc cgataacacc tcccaacctc ccggagccat ccctcctgca cctgggggac
301 cacgaagcca gctaccactc gctgtgccac ggcctcaccc ccaacggtct gctccctgcc
361 tactcctatc aggccatgga cctcccagcc atcatggtgt ccaacatgct agcacaggac
421 agccacctgc tgtcgggcca gctgcccacg atccaggaga tggtccactc ggaagtggct
481 gcctatgact cgggccggcc cgggcccctg ctgggtcgcc cggcaatgct ggccagccac
541 atgagtgccc tcagccagtc ccagctcatc tcgcagatgg gcatccggag cagcatcgcc
601 cacagctccc catcaccgcc ggggagcaag tcagcgaccc cctctccctc cagctccact
661 caggaagagg agtcggaagt gcatttcaag atctcgggag aaaagagacc ttcagccgac
721 ccaggaaaaa aggccaagaa cccgaagaag aagaaaaaga aggaccccaa tgagccgcag
781 aagcctgtgt cggcctacgc actcttcttc agagacactc aggccgccat caagggtcag
841 aaccccagtg ccactttcgg tgacgtgtcc aaaatcgtgg cctccatgtg ggacagcctg
901 ggagaggaac agaagcaggc ctacaagagg aagacagaag cagcaaagaa ggaatatctg
961 aaggccctgg cagcctaccg ggctagcctc gtctccaaga gctccccaga tcaaggtgag
1021 accaagagca ctcaggcaaa cccaccagcc aaaatgctcc cacccaagca gcccatgtat
1081 gccatgccag gcctggcctc cttcctgacg ccgtcggacc tgcaggcctt ccgcagtggg
1141 gcctcccctg ccagcctcgc ccggacgctg ggctccaagt ctctgctgcc aggcctcaga
1201 cttcccgcac atctctgagt tccccagcag ctcgggatcc tgctcacctg gcccatccaa
1261 ccccaccagc agcggggact gggacagcag ctaccccagt ggggagtgtg gcatcagcac
1321 ctgcagcctg ctccccaggg acaaatcgct ctacctcacc taatcccgcc tccctaccat
1381 ccctgaggct cgctggaagg cactgctcag agcctgaagg gctgacagca gaaaagaggc
1441 cctggccaga ggcagggtgg cccatcggag agagcagtga cacacccatt gcccgggggc
1501 tgagtctctt cctcaacctc ccaccagact ctgcagaggc agcccactgc ccaccaccag
1561 cccaaagaac ctgcaggaac cttccgcccg ctgacctgct tgctccaggg taactgtgga
1621 ccctgtcctc gccctgcgca cggtacccta tgtctggaca cccggcccca gctccagccc
1681 cagcccaggt gggccgcccc tggcggggtc gcttaccaac ggacacccac cccagatgca
1741 tgggccagag ggccggcccc cggcatagat gtgcacatcg gttttccagt gtgaacaaaa
1801 gattacgaaa cctagaaact gttggttccg tgtaagtagt tgactacgtg ttttagaact
1861 gtgctgaaga catctgtaag actattttgt gggggaaaaa agtagtttcc tttaaggtaa
1921 aaagcatttt atatgatcct tagcacattt ttaagtttta tcttaaggga gacgcgcaca
1981 aaagcggctg ccaaaccgtt tcgtcatcct cacagcaagg accggacgct tgctagccac
2041 cccggagcac tgctctcctt ttaatcatgt attcatctat tttaaattgc cggcgacgac
2101 ttttgtctat ttatgaagaa accttgagaa cgaagttaca gcttatccta ccgtgtgtgt
2161 ggttttgggg tttcgtttgg gtttgggttc ttgacgtcgt ttgcagctgt ttcctggccc
2221 tggcgagtgt ctgtcttggt gcccagtgct tctctcaaat ctctttataa taaaacttct
2281 gaaaagctga aaaaaaaaaa aaaaaaaaaa aaaa
//