LOCUS JH159137 191409 bp DNA linear CON 06-JAN-2017
DEFINITION Homo sapiens chromosome 11 genomic contig, GRCh38 reference
assembly alternate locus group ALT_REF_LOCI_1.
ACCESSION JH159137
VERSION JH159137.1
DBLINK BioProject: PRJNA31257
KEYWORDS ALTERNATE_LOCUS.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 191409)
AUTHORS Lander,E.S., Linton,L.M., Birren,B., Nusbaum,C., Zody,M.C.,
Baldwin,J., Devon,K., Dewar,K., Doyle,M., FitzHugh,W., Funke,R.,
Gage,D., Harris,K., Heaford,A., Howland,J., Kann,L., Lehoczky,J.,
LeVine,R., McEwan,P., McKernan,K., Meldrim,J., Mesirov,J.P.,
Miranda,C., Morris,W., Naylor,J., Raymond,C., Rosetti,M.,
Santos,R., Sheridan,A., Sougnez,C., Stange-Thomann,N.,
Stojanovic,N., Subramanian,A., Wyman,D., Rogers,J., Sulston,J.,
Ainscough,R., Beck,S., Bentley,D., Burton,J., Clee,C., Carter,N.,
Coulson,A., Deadman,R., Deloukas,P., Dunham,A., Dunham,I.,
Durbin,R., French,L., Grafham,D., Gregory,S., Hubbard,T.,
Humphray,S., Hunt,A., Jones,M., Lloyd,C., McMurray,A., Matthews,L.,
Mercer,S., Milne,S., Mullikin,J.C., Mungall,A., Plumb,R., Ross,M.,
Shownkeen,R., Sims,S., Waterston,R.H., Wilson,R.K., Hillier,L.W.,
McPherson,J.D., Marra,M.A., Mardis,E.R., Fulton,L.A.,
Chinwalla,A.T., Pepin,K.H., Gish,W.R., Chissoe,S.L., Wendl,M.C.,
Delehaunty,K.D., Miner,T.L., Delehaunty,A., Kramer,J.B., Cook,L.L.,
Fulton,R.S., Johnson,D.L., Minx,P.J., Clifton,S.W., Hawkins,T.,
Branscomb,E., Predki,P., Richardson,P., Wenning,S., Slezak,T.,
Doggett,N., Cheng,J.F., Olsen,A., Lucas,S., Elkin,C.,
Uberbacher,E., Frazier,M., Gibbs,R.A., Muzny,D.M., Scherer,S.E.,
Bouck,J.B., Sodergren,E.J., Worley,K.C., Rives,C.M., Gorrell,J.H.,
Metzker,M.L., Naylor,S.L., Kucherlapati,R.S., Nelson,D.L.,
Weinstock,G.M., Sakaki,Y., Fujiyama,A., Hattori,M., Yada,T.,
Toyoda,A., Itoh,T., Kawagoe,C., Watanabe,H., Totoki,Y., Taylor,T.,
Weissenbach,J., Heilig,R., Saurin,W., Artiguenave,F., Brottier,P.,
Bruls,T., Pelletier,E., Robert,C., Wincker,P., Smith,D.R.,
Doucette-Stamm,L., Rubenfield,M., Weinstock,K., Lee,H.M.,
Dubois,J., Rosenthal,A., Platzer,M., Nyakatura,G., Taudien,S.,
Rump,A., Yang,H., Yu,J., Wang,J., Huang,G., Gu,J., Hood,L.,
Rowen,L., Madan,A., Qin,S., Davis,R.W., Federspiel,N.A.,
Abola,A.P., Proctor,M.J., Myers,R.M., Schmutz,J., Dickson,M.,
Grimwood,J., Cox,D.R., Olson,M.V., Kaul,R., Raymond,C., Shimizu,N.,
Kawasaki,K., Minoshima,S., Evans,G.A., Athanasiou,M., Schultz,R.,
Roe,B.A., Chen,F., Pan,H., Ramser,J., Lehrach,H., Reinhardt,R.,
McCombie,W.R., de la Bastide,M., Dedhia,N., Blocker,H.,
Hornischer,K., Nordsiek,G., Agarwala,R., Aravind,L., Bailey,J.A.,
Bateman,A., Batzoglou,S., Birney,E., Bork,P., Brown,D.G.,
Burge,C.B., Cerutti,L., Chen,H.C., Church,D., Clamp,M.,
Copley,R.R., Doerks,T., Eddy,S.R., Eichler,E.E., Furey,T.S.,
Galagan,J., Gilbert,J.G., Harmon,C., Hayashizaki,Y., Haussler,D.,
Hermjakob,H., Hokamp,K., Jang,W., Johnson,L.S., Jones,T.A.,
Kasif,S., Kaspryzk,A., Kennedy,S., Kent,W.J., Kitts,P.,
Koonin,E.V., Korf,I., Kulp,D., Lancet,D., Lowe,T.M., McLysaght,A.,
Mikkelsen,T., Moran,J.V., Mulder,N., Pollara,V.J., Ponting,C.P.,
Schuler,G., Schultz,J., Slater,G., Smit,A.F., Stupka,E.,
Szustakowski,J., Thierry-Mieg,D., Thierry-Mieg,J., Wagner,L.,
Wallis,J., Wheeler,R., Williams,A., Wolf,Y.I., Wolfe,K.H.,
Yang,S.P., Yeh,R.F., Collins,F., Guyer,M.S., Peterson,J.,
Felsenfeld,A., Wetterstrand,K.A., Patrinos,A., Morgan,M.J., de
Jong,P., Catanese,J.J., Osoegawa,K., Shizuya,H., Choi,S. and
Chen,Y.J.
CONSRTM International Human Genome Sequencing Consortium
TITLE Initial sequencing and analysis of the human genome
JOURNAL Nature 409 (6822), 860-921 (2001)
PUBMED 11237011
REMARK Erratum:[Nature 2001 Aug 2;412(6846):565]
REFERENCE 2 (bases 1 to 191409)
CONSRTM International Human Genome Sequencing Consortium
TITLE Finishing the euchromatic sequence of the human genome
JOURNAL Nature 431 (7011), 931-945 (2004)
PUBMED 15496913
REFERENCE 3 (bases 1 to 191409)
CONSRTM Genome Reference Consortium
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2013) NCBI, NIH, Bethesda, MD 20892, USA
COMMENT The DNA sequence is composed of genomic sequence, primarily
finished clones that were sequenced as part of the Human Genome
Project. PCR products and WGS shotgun sequence have been added
where necessary to fill gaps or correct errors. All such additions
are manually curated by GRC staff. For more information see:
https://genomereference.org.
Fosmid clone AC213223.1 has a 10 kb insertion in relative to
NC_000011.9 component AP004245.2 and provides representation for
OR9G9 (NM_001013358.1).
Region: OLFACTORY_REGION_1.
FEATURES Location/Qualifiers
source 1..191409
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/chromosome="11"
/map="11q12.1"
misc_feature 33894..191409
/note="Anchor sequence. This sequence is derived from alt
loci or patch scaffold components that are also components
of the primary assembly unit. It was included to ensure a
robust alignment of this scaffold to the primary assembly
unit. Anchor component: AP001803.4"
CONTIG join(complement(AC213223.1:1..33893),AP001803.4:1857..159372)
//