LOCUS JF790281 2324 bp mRNA linear HUM 25-MAY-2011
DEFINITION Homo sapiens BRCA1 associated RING domain 1 isoform beta (BARD1)
mRNA, complete cds.
ACCESSION JF790281
VERSION JF790281.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2324)
AUTHORS Li,L., Cohen,M., Wu,J., Sow,M.H., Nikolic,B., Bischof,P. and
Irminger-Finger,I.
TITLE Identification of BARD1 splice-isoforms involved in human
trophoblast invasion
JOURNAL Int. J. Biochem. Cell Biol. 39 (9), 1659-1672 (2007)
PUBMED 17556008
REFERENCE 2 (bases 1 to 2324)
AUTHORS Li,L., Ryser,S., Dizin,E., Pils,D., Krainer,M., Jefford,C.E.,
Bertoni,F., Zeillinger,R. and Irminger-Finger,I.
TITLE Oncogenic BARD1 isoforms expressed in gynecological cancers
JOURNAL Cancer Res. 67 (24), 11876-11885 (2007)
PUBMED 18089818
REFERENCE 3 (bases 1 to 2324)
AUTHORS Irminger-Finger,I.
TITLE Direct Submission
JOURNAL Submitted (05-APR-2011) Department of Gynecology and Obstetrics,
Geneva University Hospitals, 30, Bld de la Cluse, Geneva 1211,
Switzerland
FEATURES Location/Qualifiers
source 1..2324
/db_xref="H-InvDB:HIT000653779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2324
/gene="BARD1"
CDS 159..2201
/gene="BARD1"
/codon_start=1
/product="BRCA1 associated RING domain 1 isoform beta"
/protein_id="AEF57472.1"
/translation="MVAVPGPTVAPRSTAWRSCCAARVDLKEDKPRKSLFNDAGNKKN
SIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERAKKAS
ARSGKKQKKKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVSFCSQPSVISSPQINGE
IDLLASGSLTESECFGSLTEVSLPLAEQIESPDTKSRNEVVTPEKVCKNYLTSKKSLP
LENNGKRGHHNRLSSPISKRCRTSILSTSGDFVKQTVPSENIPLPECSSPPSCKRKVG
GTSGRKNSNMSDEFISLSPGTPPSTLSSSSYRQVMSSPSAMKLLPNMAVKRNHRGETL
LHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT
TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE
KNESSSASHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVT
HVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPRRSRLN
REQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVA
YHARPDSDQRFCTQYIIYEDLCNYHPERVRQGKVWKAPSSWFIDCVMSFELLPLDS"
BASE COUNT 702 a 486 c 536 g 600 t
ORIGIN
1 cagcttccct gtggtttccc gaggcttcct tgcttcccgc tctgcgagga gcctttcatc
61 cgaaggcggg acgatgccgg ataatcggca gccgaggaac cggcagccga ggatccgctc
121 cgggaacgag cctcgttccg cgcccgccat ggaaccggat ggtcgcggtg cctgggccca
181 cagtcgcgcc gcgctcgacc gcctggagaa gctgctgcgc tgctcgcgtt gatttgaaag
241 aagataaacc taggaaaagt ttgtttaatg atgcaggaaa caagaagaat tcaattaaaa
301 tgtggtttag ccctcgaagt aagaaagtca gatatgttgt gagtaaagct tcagtgcaaa
361 cccagcctgc aataaaaaaa gatgcaagtg ctcagcaaga ctcatatgaa tttgtttccc
421 caagtcctcc tgcagatgtt tctgagaggg ctaaaaaggc ttctgcaaga tctggaaaaa
481 agcaaaaaaa gaaaacttta gctgaaatca accaaaaatg gaatttagag gcagaaaaag
541 aagatggtga atttgactcc aaagaggaat ctaagcaaaa gctggtatcc ttctgtagcc
601 aaccatctgt tatctccagt cctcagataa atggtgaaat agacttacta gcaagtggct
661 ccttgacaga atctgaatgt tttggaagtt taactgaagt ctctttacca ttggctgagc
721 aaatagagtc tccagacact aagagcagga atgaagtagt gactcctgag aaggtctgca
781 aaaattatct tacatctaag aaatctttgc cattagaaaa taatggaaaa cgtggccatc
841 acaatagact ttccagtccc atttctaaga gatgtagaac cagcattctg agcaccagtg
901 gagattttgt taagcaaacc gtgccctcag aaaatatacc attgcctgaa tgttcttcac
961 caccttcatg caaacgtaaa gttggtggta catcagggag gaaaaacagt aacatgtccg
1021 atgaattcat tagtctttca ccaggtacac caccttctac attaagtagt tcaagttaca
1081 ggcaagtgat gtctagtccc tcagcaatga agctgttgcc caatatggct gtgaaaagaa
1141 atcatagagg agagactttg ctccatattg cttctattaa gggcgacata ccttctgttg
1201 aatacctttt acaaaatgga agtgatccaa atgttaaaga ccatgctgga tggacaccat
1261 tgcatgaagc ttgcaatcat gggcacctga aggtagtgga attattgctc cagcataagg
1321 cattggtgaa caccaccggg tatcaaaatg actcaccact tcacgatgca gccaagaatg
1381 ggcacgtgga tatagtcaag ctgttacttt cctatggagc ctccagaaat gctgttaata
1441 tatttggtct gcggcctgtc gattatacag atgatgaaag tatgaaatcg ctattgctgc
1501 taccagagaa gaatgaatca tcctcagcta gccactgctc agtaatgaac actgggcagc
1561 gtagggatgg acctcttgta cttataggca gtgggctgtc ttcagaacaa cagaaaatgc
1621 tcagtgagct tgcagtaatt cttaaggcta aaaaatatac tgagtttgac agtacagtaa
1681 ctcatgttgt tgttcctggt gatgcagttc aaagtacctt gaagtgtatg cttgggattc
1741 tcaatggatg ctggattcta aaatttgaat gggtaaaagc atgtctacga agaaaagtat
1801 gtgaacagga agaaaagtat gaaattcctg aaggtccacg cagaagcagg ctcaacagag
1861 aacagctgtt gccaaagctg tttgatggat gctacttcta tttgtgggga accttcaaac
1921 accatccaaa ggacaacctt attaagctcg tcactgcagg tgggggccag atcctcagta
1981 gaaagcccaa gccagacagt gacgtgactc agaccatcaa tacagtcgca taccatgcga
2041 gacccgattc tgatcagcgc ttctgcacac agtatatcat ctatgaagat ttgtgtaatt
2101 atcacccaga gagggttcgg cagggcaaag tctggaaggc tccttcgagc tggtttatag
2161 actgtgtgat gtcctttgag ttgcttcctc ttgacagctg aatattatac cagatgaaca
2221 tttcaaattg aatttgcacg gtttgtgaga gcccagtcat tgtactgttt ttaatgttca
2281 catttttaca aataggtaga gtcattcata tttgtctttg aatc
//