LOCUS JF790280 2473 bp mRNA linear HUM 25-MAY-2011 DEFINITION Homo sapiens BRCA1 associated RING domain 1 isoform alfa (BARD1) mRNA, complete cds. ACCESSION JF790280 VERSION JF790280.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2473) AUTHORS Li,L., Cohen,M., Wu,J., Sow,M.H., Nikolic,B., Bischof,P. and Irminger-Finger,I. TITLE Identification of BARD1 splice-isoforms involved in human trophoblast invasion JOURNAL Int. J. Biochem. Cell Biol. 39 (9), 1659-1672 (2007) PUBMED 17556008 REFERENCE 2 (bases 1 to 2473) AUTHORS Li,L., Ryser,S., Dizin,E., Pils,D., Krainer,M., Jefford,C.E., Bertoni,F., Zeillinger,R. and Irminger-Finger,I. TITLE Oncogenic BARD1 isoforms expressed in gynecological cancers JOURNAL Cancer Res. 67 (24), 11876-11885 (2007) PUBMED 18089818 REFERENCE 3 (bases 1 to 2473) AUTHORS Irminger-Finger,I. and Pilyugin,M. TITLE Direct Submission JOURNAL Submitted (05-APR-2011) Department of Gynecology and Obstetrics, Geneva University Hospitals, 30, Bld de la Cluse, Geneva 1211, Switzerland FEATURES Location/Qualifiers source 1..2473 /db_xref="H-InvDB:HIT000653778" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..2473 /gene="BARD1" CDS 74..2350 /gene="BARD1" /codon_start=1 /product="BRCA1 associated RING domain 1 isoform alfa" /protein_id="AEF57471.1" /translation="MPDNRQPRNRQPRIRSGNEPRSAPAMEPDGRGAWAHSRAALDRL EKLLRCSRCNCVSDCIGTGCPVCYTPAWIQDLKINRQLDSMIQLCSKLRNLLHDNELS DLKEDKPRKSLFNDAGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDS YEFVSPSPPADVSERAKKASARSGKKQKKKTLAEINQKWNLEAEKEDGEFDSKEESKQ KLVSFCSQPSVISSPQINGEIDLLASGSLTESECFGSLTEVSLPLAEQIESPDTKSRN EVVTPEKVCKNYLTSKKSLPLENNGKRGHHNRLSSPISKRCRTSILSTSGDFVKQTVP SENIPLPECSSPPSCKRKVGGTSGRKNSNMSDEFISLSPGTPPSTLSSSSYRQVMSSP SAMKLLPNMAVKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEAC NHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG LRPVDYTDDESMKSLLLLPEKNESSSASHCSVMNTGQRRDGPLVLIGSGLSSEQQKML SELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRK VCEQEEKYEIPEGPRRSRLNREQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQ ILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCNYHPERVRQGKVWKAP SSWFIDCVMSFELLPLDS" BASE COUNT 748 a 513 c 571 g 641 t ORIGIN 1 cagcttccct gtggtttccc gaggcttcct tgcttcccgc tctgcgagga gcctttcatc 61 cgaaggcggg acgatgccgg ataatcggca gccgaggaac cggcagccga ggatccgctc 121 cgggaacgag cctcgttccg cgcccgccat ggaaccggat ggtcgcggtg cctgggccca 181 cagtcgcgcc gcgctcgacc gcctggagaa gctgctgcgc tgctcgcgtt gtaattgtgt 241 aagtgactgc attggaactg gatgtccagt gtgttacacc ccggcctgga tacaagactt 301 gaagataaat agacaactgg acagcatgat tcaactttgt agtaagcttc gaaatttgct 361 acatgacaat gagctgtcag atttgaaaga agataaacct aggaaaagtt tgtttaatga 421 tgcaggaaac aagaagaatt caattaaaat gtggtttagc cctcgaagta agaaagtcag 481 atatgttgtg agtaaagctt cagtgcaaac ccagcctgca ataaaaaaag atgcaagtgc 541 tcagcaagac tcatatgaat ttgtttcccc aagtcctcct gcagatgttt ctgagagggc 601 taaaaaggct tctgcaagat ctggaaaaaa gcaaaaaaag aaaactttag ctgaaatcaa 661 ccaaaaatgg aatttagagg cagaaaaaga agatggtgaa tttgactcca aagaggaatc 721 taagcaaaag ctggtatcct tctgtagcca accatctgtt atctccagtc ctcagataaa 781 tggtgaaata gacttactag caagtggctc cttgacagaa tctgaatgtt ttggaagttt 841 aactgaagtc tctttaccat tggctgagca aatagagtct ccagacacta agagcaggaa 901 tgaagtagtg actcctgaga aggtctgcaa aaattatctt acatctaaga aatctttgcc 961 attagaaaat aatggaaaac gtggccatca caatagactt tccagtccca tttctaagag 1021 atgtagaacc agcattctga gcaccagtgg agattttgtt aagcaaaccg tgccctcaga 1081 aaatatacca ttgcctgaat gttcttcacc accttcatgc aaacgtaaag ttggtggtac 1141 atcagggagg aaaaacagta acatgtccga tgaattcatt agtctttcac caggtacacc 1201 accttctaca ttaagtagtt caagttacag gcaagtgatg tctagtccct cagcaatgaa 1261 gctgttgccc aatatggctg tgaaaagaaa tcatagagga gagactttgc tccatattgc 1321 ttctattaag ggcgacatac cttctgttga atacctttta caaaatggaa gtgatccaaa 1381 tgttaaagac catgctggat ggacaccatt gcatgaagct tgcaatcatg ggcacctgaa 1441 ggtagtggaa ttattgctcc agcataaggc attggtgaac accaccgggt atcaaaatga 1501 ctcaccactt cacgatgcag ccaagaatgg gcacgtggat atagtcaagc tgttactttc 1561 ctatggagcc tccagaaatg ctgttaatat atttggtctg cggcctgtcg attatacaga 1621 tgatgaaagt atgaaatcgc tattgctgct accagagaag aatgaatcat cctcagctag 1681 ccactgctca gtaatgaaca ctgggcagcg tagggatgga cctcttgtac ttataggcag 1741 tgggctgtct tcagaacaac agaaaatgct cagtgagctt gcagtaattc ttaaggctaa 1801 aaaatatact gagtttgaca gtacagtaac tcatgttgtt gttcctggtg atgcagttca 1861 aagtaccttg aagtgtatgc ttgggattct caatggatgc tggattctaa aatttgaatg 1921 ggtaaaagca tgtctacgaa gaaaagtatg tgaacaggaa gaaaagtatg aaattcctga 1981 aggtccacgc agaagcaggc tcaacagaga acagctgttg ccaaagctgt ttgatggatg 2041 ctacttctat ttgtggggaa ccttcaaaca ccatccaaag gacaacctta ttaagctcgt 2101 cactgcaggt gggggccaga tcctcagtag aaagcccaag ccagacagtg acgtgactca 2161 gaccatcaat acagtcgcat accatgcgag acccgattct gatcagcgct tctgcacaca 2221 gtatatcatc tatgaagatt tgtgtaatta tcacccagag agggttcggc agggcaaagt 2281 ctggaaggct ccttcgagct ggtttataga ctgtgtgatg tcctttgagt tgcttcctct 2341 tgacagctga atattatacc agatgaacat ttcaaattga atttgcacgg tttgtgagag 2401 cccagtcatt gtactgtttt taatgttcac atttttacaa ataggtagag tcattcatat 2461 ttgtctttga atc //