LOCUS       HUMCA1XIA               6158 bp    mRNA    linear   HUM 31-OCT-1994
DEFINITION  Human alpha-1 type XI collagen (COL11A1) mRNA, complete cds.
ACCESSION   J04177 J05407
VERSION     J04177.1
KEYWORDS    alpha-1 type XI collagen; collagen; type XI collagen.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1773 to 6158)
  AUTHORS   Bernard,M., Yoshioka,H., Rodriguez,E., Van der Rest,M., Kimura,T.,
            Ninomiya,Y., Olsen,B.R. and Ramirez,F.
  TITLE     Cloning and sequencing of pro-alpha 1 (XI) collagen cDNA
            demonstrates that type XI belongs to the fibrillar class of
            collagens and reveals that the expression of the gene is not
            restricted to cartilagenous tissue
  JOURNAL   J. Biol. Chem. 263 (32), 17159-17166 (1988)
   PUBMED   3182841
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Yoshioka,H. and Ramirez,F.
  TITLE     Pro-alpha 1(XI) collagen. Structure of the amino-terminal
            propeptide and expression of the gene in tumor cell lines
  JOURNAL   J. Biol. Chem. 265 (11), 6423-6426 (1990)
   PUBMED   1690726
COMMENT     Original source text: Human placenta fibroblast, cDNA to mRNA,
            clone OK4 [1].
            Draft entry and computer-readable sequence for [1] kindly submitted
            by F.Ramirez, 02-FEB-1990; for [2] by M.Bernard, 21-SEP-1988.
FEATURES             Location/Qualifiers
     source          1..6158
                     /db_xref="H-InvDB:HIT000191251"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /map="1p21"
     gene            1..6158
                     /gene="COL11A1"
     CDS             162..5582
                     /gene="COL11A1"
                     /note="alpha-1 (type XI) collagen precursor"
                     /codon_start=1
                     /protein_id="AAA51891.1"
                     /db_xref="GDB:G00-120-595"
                     /translation="MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKA
                     LDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSIL
                     FTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIA
                     DGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEG
                     DIQQFLITGDPKAAYDYCEHYSPDCDSSAPKAAQAQEPQIDEYAPEDIIEYDYEYGEA
                     EYKEAESVTEGPTVTEETIAQTEANIVDDFQEYNYGTMESYQTEAPRHVSGTNEPNPV
                     EEIFTEEYLTGEDYDSQRKNSEDTLYENKEIDGRDSDLLVDGDLGEYDFYEYKEYEDK
                     PTSPPNEEFGPGVPAETDITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPA
                     GIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPT
                     ISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV
                     QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPP
                     GPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMG
                     PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQ
                     SGEKGALGPPGPQGPIGXPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDR
                     GEVGQIGPRGXDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTG
                     FPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGP
                     PGERGPQGPQGPVGFPGPKGPPGPPGRMGCPGHPGQRGETGFQGKTGPPGPGGVVGPQ
                     GPTGETGPIGERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPG
                     ERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPGPQGPPGPAGE
                     KGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGGKGEN
                     GPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPG
                     PPGEKGENGDVGPWGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN
                     PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPP
                     GELGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG
                     AKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP
                     PGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPA
                     GPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSSK
                     KTRRHTEGMQADADDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDL
                     QLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKP
                     GSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSG
                     SYDKALRFLGSNDEEMSYDNNPFIKTLYDGCTSRKGYEKTVIEINTPKIDQVPIVDVM
                     ISDFGDQNQKFGFEVGPVCFLG"
     sig_peptide     162..269
                     /gene="COL11A1"
                     /note="alpha-1 (type XI) collagen signal peptide"
     mat_peptide     270..1745
                     /gene="COL11A1"
                     /product="alpha-1 (type XI) collagen"
     mat_peptide     5013..5579
                     /gene="COL11A1"
                     /product="alpha-1 (type XI) collagen"
BASE COUNT         1693 a         1355 c         1746 g         1361 t
ORIGIN      
        1 aaccatcaaa tttagaagaa aaagcccttt gactttttcc ccctctccct ccccaatggc
       61 tgtgtagcaa acatccctgg cgataccttg gaaaggacga agttggtctg cagtcgcaat
      121 ttcgtgggtt gagttcacag ttgtgagtgc ggggctcgga gatggagccg tggtcctcta
      181 ggtggaaaac gaaacggtgg ctctgggatt tcaccgtaac aaccctcgca ttgaccttcc
      241 tcttccaagc tagagaggtc agaggagctg ctccagttga tgtactaaaa gcactagatt
      301 ttcacaattc tccagaggga atatcaaaaa caacgggatt ttgcacaaac agaaagaatt
      361 ctaaaggctc agatactgct tacagagttt caaagcaagc acaactcagt gccccaacaa
      421 aacagttatt tccaggtgga actttcccag aagacttttc aatactattt acagtaaaac
      481 caaaaaaagg aattcagtct ttccttttat ctatatataa tgagcatggt attcagcaaa
      541 ttggtgttga ggttgggaga tcacctgttt ttctgtttga agaccacact ggaaaacctg
      601 ccccagaaga ctatcccctc ttcagaactg ttaacatcgc tgacgggaag tggcatcggg
      661 tagcaatcag cgtggagaag aaaactgtga caatgattgt tgattgtaag aagaaaacca
      721 cgaaaccact tgatagaagt gagagagcaa ttgttgatac caatggaatc acggtttttg
      781 gaacaaggat tttggatgaa gaagtttttg agggggacat tcagcagttt ttgatcacag
      841 gtgatcccaa ggcagcatat gactactgtg agcattatag tccagactgt gactcttcag
      901 cacccaaggc tgctcaagct caggaacctc agatagatga gtatgcacca gaggatataa
      961 tcgaatatga ctatgagtat ggggaagcag agtataaaga ggctgaaagt gtaacagagg
     1021 gacccactgt aactgaggag acaatagcac agacggaggc aaacatcgtt gatgattttc
     1081 aagaatacaa ctatggaaca atggaaagtt accagacaga agctcctagg catgtttctg
     1141 ggacaaatga gccaaatcca gttgaagaaa tatttactga agaatatcta acgggagagg
     1201 attatgattc ccagaggaaa aattctgagg atacactata tgaaaacaaa gaaatagacg
     1261 gcagggattc tgatcttctg gtagatggag atttaggcga atatgatttt tatgaatata
     1321 aagaatatga agataaacca acaagccccc ctaatgaaga atttggtcca ggtgtaccag
     1381 cagaaactga tattacagaa acaagcataa atggccatgg tgcatatgga gagaaaggac
     1441 agaaaggaga accagcagtg gttgagcctg gtatgcttgt cgaaggacca ccaggaccag
     1501 caggacctgc aggtattatg ggtcctccag gtctacaagg ccccactgga ccccctggtg
     1561 accctggcga taggggcccc ccaggacgtc ctggcttacc aggggctgat ggtctacctg
     1621 gtcctcctgg tactatgttg atgttaccgt tccgttatgg tggtgatggt tccaaaggac
     1681 caaccatctc tgctcaggaa gctcaggctc aagctattct tcagcaggct cggattgctc
     1741 tgagaggccc acctggccca atgggtctaa ctggaagacc aggtcctgtg ggggggcctg
     1801 gttcatctgg ggccaaaggt gagagtggtg atccaggtcc tcagggccct cgaggcgtcc
     1861 agggtccccc tggtccaacg ggaaaacctg gaaaaagggg tcgtccaggt gcagatggag
     1921 gaagaggaat gccaggagaa cctggggcaa agggagatcg agggtttgat ggacttccgg
     1981 gtctgccagg tgacaaaggt cacaggggtg aacgaggtcc tcaaggtcct ccaggtcctc
     2041 ctggtgatga tggaatgagg ggagaagatg gagaaattgg accaagaggt cttccaggtg
     2101 aagctggccc acgaggtttg ctgggtccaa ggggaactcc aggagctcca gggcagcctg
     2161 gtatggcagg tgtagatggc cccccaggac caaaagggaa catgggtccc caaggggagc
     2221 ctgggcctcc aggtcaacaa gggaatccag gacctcaggg tcttcctggt ccacaaggtc
     2281 caattggtcc tcctggtgaa aaaggaccac aaggaaaacc aggacttgct ggacttcctg
     2341 gtgctgatgg gcctcctggt catcctggga aagaaggcca gtctggagaa aagggggctc
     2401 tgggtccccc tggtccacaa ggtcctattg gatnnccggg cccccgggga gtaaagggag
     2461 cagatggtgt cagaggtctc aagggatcta aaggtgaaaa gggtgaagat ggttttccag
     2521 gattcaaagg tgacatgggt ctaaaaggtg acagaggaga agttggtcaa attggcccaa
     2581 gagggnaaga tggccctgaa ggacccaaag gtcgagcagg cccaactgga gacccaggtc
     2641 cttcaggtca agcaggagaa aagggaaaac ttggagttcc aggattacca ggatatccag
     2701 gaagacaagg tccaaagggt tccactggat tccctgggtt tccaggtgcc aatggagaga
     2761 aaggtgcacg gggagtagct ggcaaaccag gccctcgggg tcagcgtggt ccaacgggtc
     2821 ctcgaggttc aagaggtgca agaggtccca ctgggaaacc tgggccaaag ggcacttcag
     2881 gtggcgatgg ccctcctggc cctccaggtg aaagaggtcc tcaaggacct cagggtccag
     2941 ttggattccc tggaccaaaa ggccctcctg gaccaccagg aaggatgggc tgcccaggac
     3001 accctgggca acgtggggag actggatttc aaggcaagac cggccctcct gggccagggg
     3061 gagtggttgg accacaggga ccaaccggtg agactggtcc aataggggaa cgtgggtatc
     3121 ctggtcctcc tggccctcct ggtgagcaag gtcttcctgg tgctgcagga aaagaaggtg
     3181 caaagggtga tccaggtcct caaggtatct cagggaaaga tggaccagca ggattacgtg
     3241 gtttcccagg ggaaagaggt cttcctggag ctcagggtgc acctggactg aaaggagggg
     3301 aaggtcccca gggcccacca ggtccagttg gctcaccagg agaacgtggg tcagcaggta
     3361 cagctggccc aattggttta cgagggcgcc cgggacctca gggtcctcct ggtccagctg
     3421 gagagaaagg tgctcctgga gaaaaaggtc cccaagggcc tgcagggaga gatggagttc
     3481 aaggtcctgt tggtctccca gggccagctg gtcctgccgg ctcccctggg gaagacggag
     3541 acaagggtga aattggtgag ccgggacaaa aaggcagcaa gggtggcaag ggagaaaatg
     3601 gccctcccgg tcccccaggt cttcaaggac cagttggtgc ccctggaatt gctggaggtg
     3661 atggtgaacc aggtcctaga ggacagcagg ggatgtttgg gcaaaaaggt gatgagggtg
     3721 ccagaggctt ccctggacct cctggtccaa taggtcttca gggtctgcca ggcccacctg
     3781 gtgaaaaagg tgaaaatggg gatgttggtc catgggggcc acctggtcct ccaggcccaa
     3841 gaggccctca aggtcccaat ggagctgatg gaccacaagg acccccaggt tctgttggtt
     3901 cagttggtgg tgttggagaa aagggtgaac ctggagaagc aggaaaccca gggcctcctg
     3961 gggaagcagg tgtaggcggt cccaaaggag aaagaggaga gaaaggggaa gctggtccac
     4021 ctggagctgc tggacctcca ggtgccaagg ggccgccagg tgatgatggc cctaagggta
     4081 acccgggtcc tgttggtttt cctggagatc ctggtcctcc tggggaactt ggccctgcag
     4141 gtcaagatgg tgttggtggt gacaagggtg aagatggaga tcctggtcaa ccgggtcctc
     4201 ctggcccatc tggtgaggct ggcccaccag gtcctcctgg aaaacgaggt cctcctggag
     4261 ctgcaggtgc agagggaaga caaggtgaaa aaggtgctaa gggggaagca ggtgcagaag
     4321 gtcctcctgg aaaaaccggc ccagtcggtc ctcagggacc tgcaggaaag cctggtccag
     4381 aaggtcttcg gggcatccct ggtcctgtgg gagaacaagg tctccctgga gctgcaggcc
     4441 aagatggacc acctggtcct atgggacctc ctggcttacc tggtctcaaa ggtgaccctg
     4501 gctccaaggg tgaaaaggga catcctggtt taattggcct gattggtcct ccaggagaac
     4561 aaggggaaaa aggtgaccga gggctccctg gaactcaagg atctccagga gcaaaagggg
     4621 atgggggaat tcctggtcct gctggtccct taggtccacc tggtcctcca ggcttaccag
     4681 gtcctcaagg cccaaagggt aacaaaggct ctactggacc cgctggccag aaaggtgaca
     4741 gtggtcttcc agggcctcct gggcctccag gtccacctgg tgaagtcatt cagcctttac
     4801 caatcttgtc ctccaaaaaa acgagaagac atactgaagg catgcaagca gatgcagatg
     4861 ataatattct tgattactcg gatggaatgg aagaaatatt tggttccctc aattccctga
     4921 aacaagacat cgagcatatg aaatttccaa tgggtactca gaccaatcca gcccgaactt
     4981 gtaaagacct gcaactcagc catcctgact tcccagatgg tgaatattgg attgatccta
     5041 accaaggttg ctcaggagat tccttcaaag tttactgtaa tttcacatct ggtggtgaga
     5101 cttgcattta tccagacaaa aaatctgagg gagtaagaat ttcatcatgg ccaaaggaga
     5161 aaccaggaag ttggtttagt gaatttaaga ggggaaaact gctttcatac ttagatgttg
     5221 aaggaaattc catcaatatg gtgcaaatga cattcctgaa acttctgact gcctctgctc
     5281 ggcaaaattt cacctaccac tgtcatcagt cagcagcctg gtatgatgtg tcatcaggaa
     5341 gttatgacaa agcacttcgc ttcctgggat caaatgatga ggagatgtcc tatgacaata
     5401 atccttttat caaaacactg tatgatggtt gtacgtccag aaaaggctat gaaaaaactg
     5461 tcattgaaat caatacacca aaaattgatc aagtacctat tgttgatgtc atgatcagtg
     5521 actttggtga tcagaatcag aagttcggat ttgaagttgg tcctgtttgt tttcttggct
     5581 aagattaaga caaagaacat atcaaatcaa cagaaaatgt accttggtgc caccaaccca
     5641 ttttgtgcca catgcaagtt ttgaataagg atgtatggaa aacaacgctg catatacagg
     5701 taccatttag gaaataccga tgcctttgtg ggggcagaat cacagacaaa agctttgaaa
     5761 atcataaaga tataagttgg tgtggctaag atggaaacag ggctgattct tgattcccaa
     5821 ttctcaactc tccttttcct atttgaattt ctttggtgct gtagaaaaca aaaaaagaaa
     5881 aatatatatt cataaaaaat atggtgctca ttctcatcca tccaggatgt actaaaacag
     5941 tgtgtttaat aaattgtaat tattttgtgt acagttctat actgttatct gtgtccattt
     6001 ccaaaacttg cacgtgtccc tgaattccgc tgactctaat ttatgaggat gccgaactct
     6061 gatggcaata atatatgtat tatgaaaatg aagttatgat ttccgatgac cctaagtccc
     6121 tttctttggt taatgatgaa attcctttgt gtgtgttt
//