LOCUS HQ709177 1413 bp mRNA linear HUM 12-MAR-2011
DEFINITION Homo sapiens pregnane X nuclear receptor (NR1I2) mRNA, complete
cds.
ACCESSION HQ709177
VERSION HQ709177.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Kaighin,V.A., Martin,A.L. and Aronstam,R.S.
TITLE Isolation of cDNA coding for putatively new variants of multiple
human nuclear receptors
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1413)
AUTHORS Kaighin,V.A., Martin,A.L. and Aronstam,R.S.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Biological Sciences, Missouri University of
Science and Technology, 105 Shrenk Hall, 400 W. 11th St, Rolla, MO
65409, USA
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000653723"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="NR1I20000A"
/tissue_type="liver"
gene 1..1413
/gene="NR1I2"
CDS 1..1413
/gene="NR1I2"
/note="putative new variant; variant may be generated by
alternative splicing"
/codon_start=1
/product="pregnane X nuclear receptor"
/protein_id="ADZ17384.1"
/translation="MTVTRTHHFKEGSLRAPAIPLHSAAAELASNHPRGPEANLEVRP
KESWNHADFVHCEDTESVPGKPSVNADEEVGGPQICRVCGDKATGYHFNVMTCEGCKG
FFRRAMKRNARLRCPFRKGACEITRKTRRQCQACRLRKCLESGMKKEMIMSDEAVEER
RALIKRKKSERTGTQPLGVTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGC
ELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGSVWNYKPPADSGGKEIFSLL
PHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGT
WECGRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGV
LQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRI
QDIHPFATPLMQELFGITGS"
BASE COUNT 335 a 393 c 409 g 276 t
ORIGIN
1 atgacagtca ccaggactca ccacttcaag gaggggtccc tcagagcacc tgccataccc
61 ctgcacagtg ctgcggctga gttggcttca aaccatccaa gaggcccaga agcaaacctg
121 gaggtgagac ccaaagaaag ctggaaccat gctgactttg tacactgtga ggacacagag
181 tctgttcctg gaaagcccag tgtcaacgca gatgaggaag tcggaggtcc ccaaatctgc
241 cgtgtatgtg gggacaaggc cactggctat cacttcaatg tcatgacatg tgaaggatgc
301 aagggctttt tcaggagggc catgaaacgc aacgcccggc tgaggtgccc cttccggaag
361 ggcgcctgcg agatcacccg gaagacccgg cgacagtgcc aggcctgccg cctgcgcaag
421 tgcctggaga gcggcatgaa gaaggagatg atcatgtccg acgaggccgt ggaggagagg
481 cgggccttga tcaagcggaa gaaaagtgaa cggacaggga ctcagccact gggagtgaca
541 gaggagcagc ggatgatgat cagggagctg atggacgctc agatgaaaac ctttgacact
601 accttctccc atttcaagaa tttccggctg ccaggggtgc ttagcagtgg ctgcgagttg
661 ccagagtctc tgcaggcccc atcgagggaa gaagctgcca agtggagcca ggtccggaaa
721 gatctgtgct ctttgaaggt ctctctgcag ctgcgggggg aggatggcag tgtctggaac
781 tacaaacccc cagccgacag tggcgggaaa gagatcttct ccctgctgcc ccacatggct
841 gacatgtcaa cctacatgtt caaaggcatc atcagctttg ccaaagtcat ctcctacttc
901 agggacttgc ccatcgagga ccagatctcc ctgctgaagg gggccgcttt cgagctgtgt
961 caactgagat tcaacacagt gttcaacgcg gagactggaa cctgggagtg tggccggctg
1021 tcctactgct tggaagacac tgcaggtggc ttccagcaac ttctactgga gcccatgctg
1081 aaattccact acatgctgaa gaagctgcag ctgcatgagg aggagtatgt gctgatgcag
1141 gccatctccc tcttctcccc agaccgccca ggtgtgctgc agcaccgcgt ggtggaccag
1201 ctgcaggagc aattcgccat tactctgaag tcctacattg aatgcaatcg gccccagcct
1261 gctcataggt tcttgttcct gaagatcatg gctatgctca ccgagctccg cagcatcaat
1321 gctcagcaca cccagcggct gctgcgcatc caggacatac acccctttgc tacgcccctc
1381 atgcaggagt tgttcggcat cacaggtagc tga
//