LOCUS HQ709175 1431 bp mRNA linear HUM 12-MAR-2011
DEFINITION Homo sapiens farnesoid X nuclear receptor (NR1H4) mRNA, complete
cds.
ACCESSION HQ709175
VERSION HQ709175.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1431)
AUTHORS Kaighin,V.A., Martin,A.L. and Aronstam,R.S.
TITLE Isolation of cDNA coding for putatively new variants of multiple
human nuclear receptors
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1431)
AUTHORS Kaighin,V.A., Martin,A.L. and Aronstam,R.S.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Biological Sciences, Missouri University of
Science and Technology, 105 Shrenk Hall, 400 W. 11th St, Rolla, MO
65409, USA
FEATURES Location/Qualifiers
source 1..1431
/db_xref="H-InvDB:HIT000653721"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="NR1H40000A"
/tissue_type="kidney"
gene 1..1431
/gene="NR1H4"
CDS 1..1431
/gene="NR1H4"
/note="putative new variant; variant may be generated by
alternative splicing"
/codon_start=1
/product="farnesoid X nuclear receptor"
/protein_id="ADZ17382.1"
/translation="MGSKMNLIEHSHLPTTDEFSFSENLFGVLTEQVAGPLGQNLEVE
PYSQYSNVQFPQVQPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAETLYQGETE
VAEMPVTKKPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAV
YKCKNGGNCVMDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQ
HADQTVNEDSEGRDLRQVTSTTKSCREKTELTPDQQTLLHFIMDSYNKQRMPQEITNK
ILKEEFSAEENFLILTEMATNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFL
RSAEIFNKKLPSGHSDLLEERIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAI
VILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHH
HAEMLMSWRVNDHKFTPLLCEIWDVQ"
BASE COUNT 455 a 278 c 330 g 368 t
ORIGIN
1 atgggatcaa aaatgaatct cattgaacat tcccatttac ctaccacaga tgaattttct
61 ttttctgaaa atttatttgg tgttttaaca gaacaagtgg caggtcctct gggacagaac
121 ctggaagtgg aaccatactc gcaatacagc aatgttcagt ttccccaagt tcaaccacag
181 atttcctcgt catcctatta ttccaacctg ggtttctacc cccagcagcc tgaagagtgg
241 tactctcctg gaatatatga actcaggcgt atgccagctg agactctcta ccagggagaa
301 actgaggtag cagagatgcc tgtaacaaag aagccccgca tgggcgcgtc agcagggagg
361 atcaaagggg atgagctgtg tgttgtttgt ggagacagag cctctggata ccactataat
421 gcactgacct gtgaggggtg taaaggtttc ttcaggagaa gcattaccaa aaacgctgtg
481 tacaagtgta aaaacggggg caactgtgtg atggatatgt acatgcgaag aaagtgtcaa
541 gagtgtcgac taaggaaatg caaagagatg ggaatgttgg ctgaatgtat gtatacaggc
601 ttgttaactg aaattcagtg taaatctaag cgactgagaa aaaatgtgaa gcagcatgca
661 gatcagaccg tgaatgaaga cagtgaaggt cgtgacttgc gacaagtgac ctcgacaaca
721 aagtcatgca gggagaaaac tgaactcacc ccagatcaac agactcttct acattttatt
781 atggattcat ataacaaaca gaggatgcct caggaaataa caaataaaat tttaaaagaa
841 gaattcagtg cagaagaaaa ttttctcatt ttgacggaaa tggcaaccaa tcatgtacag
901 gttcttgtag aattcacaaa aaagctacca ggatttcaga ctttggacca tgaagaccag
961 attgctttgc tgaaagggtc tgcggttgaa gctatgttcc ttcgttcagc tgagattttc
1021 aataagaaac ttccgtctgg gcattctgac ctattggaag aaagaattcg aaatagtggt
1081 atctctgatg aatatataac acctatgttt agtttttata aaagtattgg ggaactgaaa
1141 atgactcaag aggagtatgc tctgcttaca gcaattgtta tcctgtctcc agatagacaa
1201 tacataaagg atagagaggc agtagagaag cttcaggagc cacttcttga tgtgctacaa
1261 aagttgtgta agattcacca gcctgaaaat cctcaacact ttgcctgtct cctgggtcgc
1321 ctgactgaat tacggacatt caatcatcac cacgctgaga tgctgatgtc atggagagta
1381 aacgaccaca agtttacccc acttctctgt gaaatctggg acgtgcagtg a
//