LOCUS HQ589336 2270 bp mRNA linear HUM 26-JUL-2011
DEFINITION Homo sapiens catenin alpha 2 isoform CTNNA2b (CTNNA2) mRNA,
complete cds.
ACCESSION HQ589336
VERSION HQ589336.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2270)
AUTHORS Kask,M., Pruunsild,P. and Timmusk,T.
TITLE Bidirectional transcription from human LRRTM2/CTNNA1 and
LRRTM1/CTNNA2 gene loci leads to expression of N-terminally
truncated CTNNA1 and CTNNA2 isoforms
JOURNAL Biochem. Biophys. Res. Commun. 411 (1), 56-61 (2011)
PUBMED 21708131
REFERENCE 2 (bases 1 to 2270)
AUTHORS Kask,M., Pruunsild,P. and Timmusk,T.
TITLE Direct Submission
JOURNAL Submitted (07-NOV-2010) Institute of Gene Technology, Tallinn
University of Technology, Akadeemia 15, Tallinn, Harjumaa 12618,
Estonia
FEATURES Location/Qualifiers
source 1..2270
/db_xref="H-InvDB:HIT000653472"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="hippocampus"
gene 1..2270
/gene="CTNNA2"
CDS 256..1869
/gene="CTNNA2"
/note="cadherin-associated protein; uses alternative
promoter"
/codon_start=1
/product="catenin alpha 2 isoform CTNNA2b"
/protein_id="AEF32484.1"
/translation="MTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEK
EVKEYAQVFREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLA
ARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDITSVDDFLSVSENHILEDVNKCVIAL
QEGDVDTLDRTAGAIRGRAARVIHIINAEMENYEAGVYTEKVLEATKLLSETVMPRFA
EQVEVAIEALSANVPQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQ
EDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKAKIAEQVEIFHQEKSKLDAEVA
KWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVINAAKKIAEAGSRMDKLAR
AVADQCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLI
QAAKNLMNAVVLTVKASYVASTKYQKVYGTAAVNSPVVSWKMKAPEKKPLVKREKPEE
FQTRVRRGSQKKHISPVQALSEFKAMDSF"
BASE COUNT 662 a 458 c 606 g 544 t
ORIGIN
1 tagaaaagca acttgagaga agacacagga aggcaatgat ttggggcttg gctaagattt
61 ttggggtttt ttccccctct tgcgggtact ggaattctgc agtcagccag cccttttttg
121 aggtggagag gggaaatgct ttccaaaccc acctagtttg ggaagccatc caagtcccgg
181 tggtgtgaga tccagtgtgg caaaaagact ggaaggaaag aaaaaggaga tcctctcaac
241 attgcgattg ataagatgac taagaaaaca agagatctaa ggagacagct tcggaaagca
301 gtgatggatc acatatctga ctctttcctg gaaaccaatg ttcctttgct agttctcatt
361 gaggctgcaa agagcggaaa tgaaaaggaa gtgaaagaat atgcccaagt tttccgtgag
421 catgccaaca aactggtaga ggttgccaat ttggcctgtt ccatctccaa caatgaagaa
481 ggggtgaaat tagttcggat ggcagccacc cagattgaca gcctgtgtcc ccaggtcatc
541 aatgccgctc tgacactggc tgcccggcca cagagcaaag ttgctcagga taacatggac
601 gtcttcaaag accagtggga gaagcaggtc cgagtgttga cagaggccgt ggatgacatc
661 acctcagtgg atgacttcct ctctgtctca gaaaatcaca tcttggagga tgtgaacaag
721 tgtgtgatag ccctccaaga gggcgatgtg gacactctgg accggactgc aggggccatc
781 aggggccggg cagctcgagt catacacatc atcaatgctg agatggagaa ctatgaagct
841 ggggtttata ctgagaaggt gttggaagct acaaaattgc tttctgaaac agtgatgcca
901 cgcttcgctg aacaagtaga ggttgccatt gaagccctga gtgccaacgt tcctcaaccg
961 tttgaggaga atgagttcat cgatgcctct cgcctggtgt atgatggcgt tcgggacatc
1021 agaaaggctg tgctgatgat caggacccca gaagaactag aggatgattc tgactttgag
1081 caggaagatt atgatgtgcg tagcaggaca agtgttcaga ctgaggatga ccagctcatt
1141 gcagggcaga gcgcacgggc catcatggcg caactaccgc aggaggagaa ggcaaaaata
1201 gctgagcagg tggagatatt ccatcaagag aaaagcaagc tggatgcaga agtggccaaa
1261 tgggacgaca gcggcaatga tatcattgta ctggccaagc agatgtgtat gatcatgatg
1321 gaaatgacag acttcacaag aggcaaaggc ccattgaaaa atacatctga tgtcattaat
1381 gctgccaaga aaattgccga agcaggttct cgaatggaca aattagctcg tgctgtggct
1441 gatcagtgtc ctgattcagc atgtaagcag gatttattag cctaccttca acgaattgcc
1501 ttgtattgcc atcagcttaa tatctgcagc aaggtgaagg cagaagtgca gaatctggga
1561 ggagagctca ttgtgtcagg gctggacagt gccacatcgc ttatccaggc agctaaaaac
1621 ctgatgaatg ctgttgtcct cacggtgaaa gcatcctatg tggcctcaac caaataccag
1681 aaggtctatg ggacagcagc tgtcaactca cctgttgtgt cttggaagat gaaggctcca
1741 gagaagaagc cccttgtgaa gagagaaaag cctgaagaat tccagacacg agttcgacga
1801 ggttctcaga agaaacacat ttcgcctgta caggctttaa gtgaattcaa agcaatggat
1861 tccttctagg acgataggtt ttaacaagaa agctttttct ttcttttctt tctttctttt
1921 tctttttaat tccatttttg tatgcatacc tgccagctcg tatgcctctg gcatggggaa
1981 attaagggaa cagtgtctgt ttgcatgtaa gatgagatga gatcaatact actgatccat
2041 ctgtagcctg ggaaggagac aggacattcc tgtactaagg tggcacagag ctgtcctttg
2101 caacattctc ataaaattgg gcacagagtt cgcattggcg caatatttat gggagtggga
2161 gggatgggga aaataaactt aactctacaa aagcaaactc taatgcatgc aagaatcatt
2221 aggttggcag gtatatgcat aagtgaaaaa tctggaagtg taatggtaga
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