LOCUS HQ021442 2166 bp mRNA linear HUM 17-OCT-2010 DEFINITION Homo sapiens surfactant protein A1 variant ACD' 6A4 (SFTPA1) mRNA, complete cds, alternatively spliced. ACCESSION HQ021442 VERSION HQ021442.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2166) AUTHORS Silveyra,P., Wang,G. and Floros,J. TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail differentially affect the in vitro translation of a reporter gene JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010) PUBMED 20693318 REFERENCE 2 (bases 1 to 2166) AUTHORS Silveyra,P., Wang,G. and Floros,J. TITLE Direct Submission JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine, 500 University Drive, Hershey, PA 17033, USA FEATURES Location/Qualifiers source 1..2166 /db_xref="H-InvDB:HIT000652904" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..2166 /gene="SFTPA1" 5'UTR 1..127 /gene="SFTPA1" /note="ACD'" CDS 128..874 /gene="SFTPA1" /note="alternatively spliced" /codon_start=1 /product="surfactant protein A1 variant ACD' 6A4" /protein_id="ADO27685.1" /translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG WGKEQCVEMYTDGQWNDRNCLYSRLTICEF" 3'UTR 875..2166 /gene="SFTPA1" /note="6A4" BASE COUNT 518 a 599 c 556 g 493 t ORIGIN 1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtggcctgga gaccccacaa 61 cctccagccg gaggcctgaa gcatgaggcc atgccaggtg ccaggagcag cgactggacc 121 cagagccatg tggctgtgcc ctctggccct caacctcatc ttgatggcag cctctggtgc 181 tgtgtgcgaa gtgaaggacg tttgtgttgg aagccctggt atccccggca ctcctggatc 241 ccacggcctg ccaggcaggg acgggagaga tggtctcaaa ggagaccctg gccctccagg 301 ccccatgggt ccgcctggag aaatgccatg tcctcctgga aatgatgggc tgcctggagc 361 ccctggtatc cctggagagt gtggagagaa gggggagcct ggcgagaggg gccctccagg 421 gcttccagct catctagatg aggagctcca agccacactc cacgacttta gacatcaaat 481 cctgcagaca aggggagccc tcagtctgca gggctccata atgacagtag gagagaaggt 541 cttctccagc aatgggcagt ccatcacttt tgatgccatt caggaggcat gtgccagagc 601 aggcggccgc attgctgtcc caaggaatcc agaggaaaat gaggccattg caagcttcgt 661 gaagaagtac aacacatatg cctatgtagg cctgactgag ggtcccagcc ctggagactt 721 ccgctactca gacgggaccc ctgtaaacta caccaactgg taccgagggg agcccgcagg 781 ttggggaaaa gagcagtgtg tggagatgta cacagatggg cagtggaatg acaggaactg 841 cctgtactcc cgactgacca tctgtgagtt ctgagaggca tttaggccat gggacaggga 901 ggacgctctc tggccttcgg cctccatcct gaggctccac ttggtctgtg agatgctaga 961 actccctttc aacagaattc acttgtggct attgggactg gaggcaccct tagccacttc 1021 attcctctga tgggccctga ctcttcccca taatcactga ccagccttga cactcccctt 1081 gcaaaccacc cagcactgca ccccaggcag ccactcttag cattggcctt cgacatgaga 1141 tggagccctc cttattcccc atctggtcca gttccttcac ttacagatgg cagcagtgag 1201 gtcttggggt agaaggaccc tccaaagtca cacaaagtgc ctgcctcctg gtcccctcag 1261 ctccctctct gcaacccagt gccatcagga tgagcaatcc tggccaagca taatgacaga 1321 gagaggcaga cttcggggaa gccctgactg tgcagagcta aggacacagt ggagattctc 1381 tggcactctg aggtctctgt ggcaggcctg gtcaggctct ccatgaggtt agaaggccag 1441 gtagtgttcc agcagggtgg tggccaagcc aaccccatga ttgatgtgta cgattcactc 1501 ctttgagtct ttgaatggca actcagcccc ctgacctgaa gacagccagc ctaggcctct 1561 agggtgacct agagccgcct tcagatgtga cccgagtaac tttcaactga tgaacaaatc 1621 tgcaccctac ttcagatttc agtgggcatt cacatcaccc cccacaccac tggctctgct 1681 ttctcctttc attaatccat tcacccagat atttcattaa aattatcacg tgccaggtct 1741 taggatatgt cgtggggtgg gcaaggtaat cagtgacagt tgaagatttt tttttcccag 1801 agcttatgtc ttcatctgtg aaatgggaat aagatacttg ttgctgtcac agttattacc 1861 atccccccag ctaccaaaat tactaccaga actgttacta tacacagagg ctattgactg 1921 agcacctatc atttgccaag aaccttgaca agcacttcta atacagcata ttatgtacta 1981 ttcaatcttc acacaatgtc acgggaccag tattgtttcc tcatttttta taaggacact 2041 gaagcttgga ggagttaaat gttttgagta ttattccaga gagcaagtgg cagaggctgg 2101 atccaaaccc atcttcctgg acctgaagct tatgcttcca gccaccccac tcctgagctg 2161 aataaa //