LOCUS HQ021441 2166 bp mRNA linear HUM 17-OCT-2010 DEFINITION Homo sapiens surfactant protein A1 variant ACD' 6A3 (SFTPA1) mRNA, complete cds, alternatively spliced. ACCESSION HQ021441 VERSION HQ021441.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2166) AUTHORS Silveyra,P., Wang,G. and Floros,J. TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail differentially affect the in vitro translation of a reporter gene JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010) PUBMED 20693318 REFERENCE 2 (bases 1 to 2166) AUTHORS Silveyra,P., Wang,G. and Floros,J. TITLE Direct Submission JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine, 500 University Drive, Hershey, PA 17033, USA FEATURES Location/Qualifiers source 1..2166 /db_xref="H-InvDB:HIT000652903" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..2166 /gene="SFTPA1" 5'UTR 1..127 /gene="SFTPA1" /note="ACD'" CDS 128..874 /gene="SFTPA1" /note="alternatively spliced" /codon_start=1 /product="surfactant protein A1 variant ACD' 6A3" /protein_id="ADO27684.1" /translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG RGKEQCVEMYTDGQWNDRNCLYSRLTICEF" 3'UTR 875..2166 /gene="SFTPA1" /note="6A3" BASE COUNT 516 a 599 c 555 g 496 t ORIGIN 1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtggcctgga gaccccacaa 61 cctccagccg gaggcctgaa gcatgaggcc atgccaggtg ccaggagcag cgactggacc 121 cagagccatg tggctgtgcc ctctggccct caacctcatc ttgatggcag cctctggtgc 181 tgtgtgcgaa gtgaaggacg tttgtgttgg aagccctggt atccccggca ctcctggatc 241 ccacggcctg ccaggcaggg acgggagaga tggtctcaaa ggagaccctg gccctccagg 301 ccccatgggt ccacctggag aaatgccatg tcctcctgga aatgatgggc tgcctggagc 361 ccctggtatc cctggagagt gtggagagaa gggggagcct ggcgagaggg gccctccagg 421 gcttccagct catctagatg aggagctcca agccacactc cacgacttta gacatcaaat 481 cctgcagaca aggggagccc tcagtctgca gggctccata atgacagtag gagagaaggt 541 cttctccagc aatgggcagt ccatcacttt tgatgccatt caggaggcat gtgccagagc 601 aggcggccgc attgctgtcc caaggaatcc agaggaaaat gaggccattg caagcttcgt 661 gaagaagtac aacacatatg cctatgtagg cctgactgag ggtcccagcc ctggagactt 721 ccgctactca gacgggaccc ctgtaaacta caccaactgg taccgagggg agcccgcagg 781 tcggggaaaa gagcagtgtg tggagatgta cacagatggg cagtggaatg acaggaactg 841 cctgtactcc cgactgacca tctgtgagtt ctgagaggca tttaggccat gggacaggga 901 ggacgctctc tggccttcgg cctccatcct gaggctccac ttggtctgtg agatgctaga 961 actccctttc aacagaattc acttgtggct attgggactg gaggcaccct tagccacttc 1021 attcctctga tgggccctga ctcttcccca taatcactga ccagccttga cactcccctt 1081 gcaaactctc ccagcactgc accccaggca gccactctta gccttggcct tcgacatgag 1141 atggagccct ccttattccc catctggtcc agttccttca cttacagatg gcagcagtga 1201 ggtcttgggg tagaaggacc ctccaaagtc acacaaagtg cctgcctcct ggtcccctca 1261 gctctctctc tgcaacccag tgccatcagg atgagcaatc ctggccaagc ataatgacag 1321 agagaggcag acttcgggga agccctgact gtgcagagct aaggacacag tggagattct 1381 ctggcactct gaggtctctg tggcaggcct ggtcaggctc tccatgaggt tagaaggcca 1441 ggtagtgttc cagcagggtg gtggccaagc caaccccatg attgatgtgt acgattcact 1501 cctttgagtc tttgaatggc aactcagccc cctgacctga agacagccag cctaggcctc 1561 tagggtgacc tagagccgcc ttcagatgtg acccgagtaa ctttcaactg atgaacaaat 1621 ctgcacccta cttcagattt cagtgggcat tcacatcacc ccccacacca ctggctctgc 1681 tttctccttt cattaatcca ttcacccaga tatttcatta aaattatcac gtgccaggtc 1741 ttaggatatg tcgtggggtg ggcaaggtaa tcagtgacag ttgaagattt ttttttccca 1801 gagcttatgt cttcatctgt gaaatgggaa taagatactt gttgctgtca cagttattac 1861 catcccccca gctaccaaaa ttactaccag aactgttact atacacagag gctattgact 1921 gagcacctat catttgccaa gaaccttgac aagcacttct aatacagcat attatgtact 1981 attcaatctt cacacaatgt cacgggacca gtattgtttc ctcatttttt ataaggacac 2041 tgaagcttgg aggagttaaa tgttttgagt attattccag agagcaagtg gcagaggctg 2101 gatccaaacc catcttcctg gacctgaagc ttatgcttcc agcctcccac tcctgagctg 2161 aataaa //