LOCUS HQ021440 2178 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A1 variant ACD' 6A2 (SFTPA1) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021440
VERSION HQ021440.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2178)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2178)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2178
/db_xref="H-InvDB:HIT000652902"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2178
/gene="SFTPA1"
5'UTR 1..127
/gene="SFTPA1"
/note="ACD'"
CDS 128..874
/gene="SFTPA1"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A1 variant ACD' 6A2"
/protein_id="ADO27683.1"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGVKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 875..2178
/gene="SFTPA1"
/note="6A2"
BASE COUNT 516 a 605 c 561 g 496 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtggcctgga gaccccacaa
61 cctccagccg gaggcctgaa gcatgaggcc atgccaggtg ccaggagcag cgactggacc
121 cagagccatg tggctgtgcc ctctggccct caacctcatc ttgatggcag cctctggtgc
181 tgtgtgcgaa gtgaaggacg tttgtgttgg aagccctggt atccccggca ctcctggatc
241 ccacggcctg ccaggcaggg acgggagaga tggtgtcaaa ggagaccctg gccctccagg
301 ccccatgggt ccacctggag aaatgccatg tcctcctgga aatgatgggc tgcctggagc
361 ccctggtatc cctggagagt gtggagagaa gggggagcct ggcgagaggg gccctccagg
421 gcttccagct catctagatg aggagctcca agccacactc cacgacttta gacatcaaat
481 cctgcagaca aggggagccc tcagtctgca gggctccata atgacagtag gagagaaggt
541 cttctccagc aatgggcagt ccatcacttt tgatgccatt caggaggcat gtgccagagc
601 aggcggccgc attgctgtcc caaggaatcc agaggaaaat gaggccattg caagcttcgt
661 gaagaagtac aacacatatg cctatgtagg cctgactgag ggtcccagcc ctggagactt
721 ccgctactca gacgggaccc ctgtaaacta caccaactgg taccgagggg agcccgcagg
781 tcggggaaaa gagcagtgtg tggagatgta cacagatggg cagtggaatg acaggaactg
841 cctgtactcc cgactgacca tctgtgagtt ctgagaggca tttaggccat gggacaggga
901 ggacgctctc tggccttcgg cctccatcct gaggctccac ttggtctgtg agatgctaga
961 actccctttc aacagaattc acttgtggct attgggactg gaggcaccct tagccacttc
1021 attcctctga tgggccctga ctcttcccca taatcactga ccagccttga cactcccctt
1081 gcaaactctc ccagcactgc accccaggca gccactctta gccttggcct tcgacatgag
1141 atggagccct ccttattccc catctggtcc agttccttca cttacagatg gcagcagtga
1201 ggtcttgggg tagaaggacc ctccaaagtc acacaaagtg cctgcctcct ggtcccctca
1261 gctctgcctc tgcagcccac tgcctgccca gtgccatcag gatgagcagt cccggccaag
1321 cataatgaca gagagaggca gacttcgggg aagccctgac tgtgcagagc taaggacaca
1381 gtggagattc tctggcactc tgaggtctct gtggcaggcc tggtcaggct ctccatgagg
1441 ttagaaggcc aggtagtgtt ccagcagggt ggtggccaag ccaaccccat gattgatgtg
1501 tacgattcac tcctttgagt ctttgaatgg caactcagcc ccctgacctg aagacagcca
1561 gcctaggcct ctagggtgac ctagagccgc cttcagatgt gacccgagta actttcaact
1621 gatgaacaaa tctgcaccct acttcagatt tcagtgggca ttcacatcac cccccacacc
1681 actggctctg ctttctcctt tcattaatcc attcacccag atatttcatt aaaattatca
1741 cgtgccaggt cttaggatat gtcgtggggt gggcaaggta atcagtgaca gttgaagatt
1801 tttttttccc agagcttatg tcttcatctg tgaaatggga ataagatact tgttgctgtc
1861 acagttatta ccatcccccc agctaccaaa attactacca gaactgttac tatacacaga
1921 ggctattgac tgagcaccta ttatttgcca agaaccttga caagcacttc taatacagca
1981 tattatgtac tattcaatct tcacacaatg tcacgggacc agtattgttt cctcattttt
2041 tataaggaca ctgaagcttg gaggagttaa atgttttgag tattattcca gagagcaagt
2101 ggcagaggct ggatccaaac ccatcttcct ggacctgaag cttatgcttc cagccacccc
2161 actcctgagc tgaataaa
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