LOCUS HQ021439 2177 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A1 variant AB'D' 6A4 (SFTPA1) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021439
VERSION HQ021439.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2177)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2177)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2177
/db_xref="H-InvDB:HIT000652901"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2177
/gene="SFTPA1"
5'UTR 1..138
/gene="SFTPA1"
/note="AB'D'"
CDS 139..885
/gene="SFTPA1"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A1 variant AB'D' 6A4"
/protein_id="ADO27682.1"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
WGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 886..2177
/gene="SFTPA1"
/note="6A4"
BASE COUNT 526 a 587 c 562 g 502 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtgggtcgct gatttcttgg
61 agcctgaaaa gaaagtaaca cagcagggat gaggacagat ggtgtgagtc agtgagagca
121 gcgactggac ccagagccat gtggctgtgc cctctggccc tcaacctcat cttgatggca
181 gcctctggtg ctgtgtgcga agtgaaggac gtttgtgttg gaagccctgg tatccccggc
241 actcctggat cccacggcct gccaggcagg gacgggagag atggtctcaa aggagaccct
301 ggccctccag gccccatggg tccgcctgga gaaatgccat gtcctcctgg aaatgatggg
361 ctgcctggag cccctggtat ccctggagag tgtggagaga agggggagcc tggcgagagg
421 ggccctccag ggcttccagc tcatctagat gaggagctcc aagccacact ccacgacttt
481 agacatcaaa tcctgcagac aaggggagcc ctcagtctgc agggctccat aatgacagta
541 ggagagaagg tcttctccag caatgggcag tccatcactt ttgatgccat tcaggaggca
601 tgtgccagag caggcggccg cattgctgtc ccaaggaatc cagaggaaaa tgaggccatt
661 gcaagcttcg tgaagaagta caacacatat gcctatgtag gcctgactga gggtcccagc
721 cctggagact tccgctactc agacgggacc cctgtaaact acaccaactg gtaccgaggg
781 gagcccgcag gttggggaaa agagcagtgt gtggagatgt acacagatgg gcagtggaat
841 gacaggaact gcctgtactc ccgactgacc atctgtgagt tctgagaggc atttaggcca
901 tgggacaggg aggacgctct ctggccttcg gcctccatcc tgaggctcca cttggtctgt
961 gagatgctag aactcccttt caacagaatt cacttgtggc tattgggact ggaggcaccc
1021 ttagccactt cattcctctg atgggccctg actcttcccc ataatcactg accagccttg
1081 acactcccct tgcaaaccac ccagcactgc accccaggca gccactctta gcattggcct
1141 tcgacatgag atggagccct ccttattccc catctggtcc agttccttca cttacagatg
1201 gcagcagtga ggtcttgggg tagaaggacc ctccaaagtc acacaaagtg cctgcctcct
1261 ggtcccctca gctccctctc tgcaacccag tgccatcagg atgagcaatc ctggccaagc
1321 ataatgacag agagaggcag acttcgggga agccctgact gtgcagagct aaggacacag
1381 tggagattct ctggcactct gaggtctctg tggcaggcct ggtcaggctc tccatgaggt
1441 tagaaggcca ggtagtgttc cagcagggtg gtggccaagc caaccccatg attgatgtgt
1501 acgattcact cctttgagtc tttgaatggc aactcagccc cctgacctga agacagccag
1561 cctaggcctc tagggtgacc tagagccgcc ttcagatgtg acccgagtaa ctttcaactg
1621 atgaacaaat ctgcacccta cttcagattt cagtgggcat tcacatcacc ccccacacca
1681 ctggctctgc tttctccttt cattaatcca ttcacccaga tatttcatta aaattatcac
1741 gtgccaggtc ttaggatatg tcgtggggtg ggcaaggtaa tcagtgacag ttgaagattt
1801 ttttttccca gagcttatgt cttcatctgt gaaatgggaa taagatactt gttgctgtca
1861 cagttattac catcccccca gctaccaaaa ttactaccag aactgttact atacacagag
1921 gctattgact gagcacctat catttgccaa gaaccttgac aagcacttct aatacagcat
1981 attatgtact attcaatctt cacacaatgt cacgggacca gtattgtttc ctcatttttt
2041 ataaggacac tgaagcttgg aggagttaaa tgttttgagt attattccag agagcaagtg
2101 gcagaggctg gatccaaacc catcttcctg gacctgaagc ttatgcttcc agccacccca
2161 ctcctgagct gaataaa
//