LOCUS HQ021438 2177 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A1 variant AB'D' 6A3 (SFTPA1) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021438
VERSION HQ021438.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2177)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2177)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2177
/db_xref="H-InvDB:HIT000652900"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2177
/gene="SFTPA1"
5'UTR 1..138
/gene="SFTPA1"
/note="AB'D'"
CDS 139..885
/gene="SFTPA1"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A1 variant AB'D' 6A3"
/protein_id="ADO27681.1"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 886..2177
/gene="SFTPA1"
/note="6A3"
BASE COUNT 524 a 587 c 561 g 505 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtgggtcgct gatttcttgg
61 agcctgaaaa gaaagtaaca cagcagggat gaggacagat ggtgtgagtc agtgagagca
121 gcgactggac ccagagccat gtggctgtgc cctctggccc tcaacctcat cttgatggca
181 gcctctggtg ctgtgtgcga agtgaaggac gtttgtgttg gaagccctgg tatccccggc
241 actcctggat cccacggcct gccaggcagg gacgggagag atggtctcaa aggagaccct
301 ggccctccag gccccatggg tccacctgga gaaatgccat gtcctcctgg aaatgatggg
361 ctgcctggag cccctggtat ccctggagag tgtggagaga agggggagcc tggcgagagg
421 ggccctccag ggcttccagc tcatctagat gaggagctcc aagccacact ccacgacttt
481 agacatcaaa tcctgcagac aaggggagcc ctcagtctgc agggctccat aatgacagta
541 ggagagaagg tcttctccag caatgggcag tccatcactt ttgatgccat tcaggaggca
601 tgtgccagag caggcggccg cattgctgtc ccaaggaatc cagaggaaaa tgaggccatt
661 gcaagcttcg tgaagaagta caacacatat gcctatgtag gcctgactga gggtcccagc
721 cctggagact tccgctactc agacgggacc cctgtaaact acaccaactg gtaccgaggg
781 gagcccgcag gtcggggaaa agagcagtgt gtggagatgt acacagatgg gcagtggaat
841 gacaggaact gcctgtactc ccgactgacc atctgtgagt tctgagaggc atttaggcca
901 tgggacaggg aggacgctct ctggccttcg gcctccatcc tgaggctcca cttggtctgt
961 gagatgctag aactcccttt caacagaatt cacttgtggc tattgggact ggaggcaccc
1021 ttagccactt cattcctctg atgggccctg actcttcccc ataatcactg accagccttg
1081 acactcccct tgcaaactct cccagcactg caccccaggc agccactctt agccttggcc
1141 ttcgacatga gatggagccc tccttattcc ccatctggtc cagttccttc acttacagat
1201 ggcagcagtg aggtcttggg gtagaaggac cctccaaagt cacacaaagt gcctgcctcc
1261 tggtcccctc agctctctct ctgcaaccca gtgccatcag gatgagcaat cctggccaag
1321 cataatgaca gagagaggca gacttcgggg aagccctgac tgtgcagagc taaggacaca
1381 gtggagattc tctggcactc tgaggtctct gtggcaggcc tggtcaggct ctccatgagg
1441 ttagaaggcc aggtagtgtt ccagcagggt ggtggccaag ccaaccccat gattgatgtg
1501 tacgattcac tcctttgagt ctttgaatgg caactcagcc ccctgacctg aagacagcca
1561 gcctaggcct ctagggtgac ctagagccgc cttcagatgt gacccgagta actttcaact
1621 gatgaacaaa tctgcaccct acttcagatt tcagtgggca ttcacatcac cccccacacc
1681 actggctctg ctttctcctt tcattaatcc attcacccag atatttcatt aaaattatca
1741 cgtgccaggt cttaggatat gtcgtggggt gggcaaggta atcagtgaca gttgaagatt
1801 tttttttccc agagcttatg tcttcatctg tgaaatggga ataagatact tgttgctgtc
1861 acagttatta ccatcccccc agctaccaaa attactacca gaactgttac tatacacaga
1921 ggctattgac tgagcaccta tcatttgcca agaaccttga caagcacttc taatacagca
1981 tattatgtac tattcaatct tcacacaatg tcacgggacc agtattgttt cctcattttt
2041 tataaggaca ctgaagcttg gaggagttaa atgttttgag tattattcca gagagcaagt
2101 ggcagaggct ggatccaaac ccatcttcct ggacctgaag cttatgcttc cagcctccca
2161 ctcctgagct gaataaa
//