LOCUS HQ021437 2189 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A1 variant AB'D' 6A2 (SFTPA1) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021437
VERSION HQ021437.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2189)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2189)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2189
/db_xref="H-InvDB:HIT000652899"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2189
/gene="SFTPA1"
5'UTR 1..138
/gene="SFTPA1"
/note="AB'D'"
CDS 139..885
/gene="SFTPA1"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A1 variant AB'D' 6A2"
/protein_id="ADO27680.1"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGVKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 886..2189
/gene="SFTPA1"
/note="6A2"
BASE COUNT 524 a 593 c 567 g 505 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtgggtcgct gatttcttgg
61 agcctgaaaa gaaagtaaca cagcagggat gaggacagat ggtgtgagtc agtgagagca
121 gcgactggac ccagagccat gtggctgtgc cctctggccc tcaacctcat cttgatggca
181 gcctctggtg ctgtgtgcga agtgaaggac gtttgtgttg gaagccctgg tatccccggc
241 actcctggat cccacggcct gccaggcagg gacgggagag atggtgtcaa aggagaccct
301 ggccctccag gccccatggg tccacctgga gaaatgccat gtcctcctgg aaatgatggg
361 ctgcctggag cccctggtat ccctggagag tgtggagaga agggggagcc tggcgagagg
421 ggccctccag ggcttccagc tcatctagat gaggagctcc aagccacact ccacgacttt
481 agacatcaaa tcctgcagac aaggggagcc ctcagtctgc agggctccat aatgacagta
541 ggagagaagg tcttctccag caatgggcag tccatcactt ttgatgccat tcaggaggca
601 tgtgccagag caggcggccg cattgctgtc ccaaggaatc cagaggaaaa tgaggccatt
661 gcaagcttcg tgaagaagta caacacatat gcctatgtag gcctgactga gggtcccagc
721 cctggagact tccgctactc agacgggacc cctgtaaact acaccaactg gtaccgaggg
781 gagcccgcag gtcggggaaa agagcagtgt gtggagatgt acacagatgg gcagtggaat
841 gacaggaact gcctgtactc ccgactgacc atctgtgagt tctgagaggc atttaggcca
901 tgggacaggg aggacgctct ctggccttcg gcctccatcc tgaggctcca cttggtctgt
961 gagatgctag aactcccttt caacagaatt cacttgtggc tattgggact ggaggcaccc
1021 ttagccactt cattcctctg atgggccctg actcttcccc ataatcactg accagccttg
1081 acactcccct tgcaaactct cccagcactg caccccaggc agccactctt agccttggcc
1141 ttcgacatga gatggagccc tccttattcc ccatctggtc cagttccttc acttacagat
1201 ggcagcagtg aggtcttggg gtagaaggac cctccaaagt cacacaaagt gcctgcctcc
1261 tggtcccctc agctctgcct ctgcagccca ctgcctgccc agtgccatca ggatgagcag
1321 tcccggccaa gcataatgac agagagaggc agacttcggg gaagccctga ctgtgcagag
1381 ctaaggacac agtggagatt ctctggcact ctgaggtctc tgtggcaggc ctggtcaggc
1441 tctccatgag gttagaaggc caggtagtgt tccagcaggg tggtggccaa gccaacccca
1501 tgattgatgt gtacgattca ctcctttgag tctttgaatg gcaactcagc cccctgacct
1561 gaagacagcc agcctaggcc tctagggtga cctagagccg ccttcagatg tgacccgagt
1621 aactttcaac tgatgaacaa atctgcaccc tacttcagat ttcagtgggc attcacatca
1681 ccccccacac cactggctct gctttctcct ttcattaatc cattcaccca gatatttcat
1741 taaaattatc acgtgccagg tcttaggata tgtcgtgggg tgggcaaggt aatcagtgac
1801 agttgaagat ttttttttcc cagagcttat gtcttcatct gtgaaatggg aataagatac
1861 ttgttgctgt cacagttatt accatccccc cagctaccaa aattactacc agaactgtta
1921 ctatacacag aggctattga ctgagcacct attatttgcc aagaaccttg acaagcactt
1981 ctaatacagc atattatgta ctattcaatc ttcacacaat gtcacgggac cagtattgtt
2041 tcctcatttt ttataaggac actgaagctt ggaggagtta aatgttttga gtattattcc
2101 agagagcaag tggcagaggc tggatccaaa cccatcttcc tggacctgaa gcttatgctt
2161 ccagccaccc cactcctgag ctgaataaa
//