LOCUS HQ021436 2106 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A1 variant AD' 6A4 (SFTPA1) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021436
VERSION HQ021436.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2106)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2106
/db_xref="H-InvDB:HIT000652898"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2106
/gene="SFTPA1"
5'UTR 1..67
/gene="SFTPA1"
/note="AD'"
CDS 68..814
/gene="SFTPA1"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A1 variant AD' 6A4"
/protein_id="ADO27679.1"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
WGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 815..2106
/gene="SFTPA1"
/note="6A4"
BASE COUNT 504 a 577 c 538 g 487 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtgggagcag cgactggacc
61 cagagccatg tggctgtgcc ctctggccct caacctcatc ttgatggcag cctctggtgc
121 tgtgtgcgaa gtgaaggacg tttgtgttgg aagccctggt atccccggca ctcctggatc
181 ccacggcctg ccaggcaggg acgggagaga tggtctcaaa ggagaccctg gccctccagg
241 ccccatgggt ccgcctggag aaatgccatg tcctcctgga aatgatgggc tgcctggagc
301 ccctggtatc cctggagagt gtggagagaa gggggagcct ggcgagaggg gccctccagg
361 gcttccagct catctagatg aggagctcca agccacactc cacgacttta gacatcaaat
421 cctgcagaca aggggagccc tcagtctgca gggctccata atgacagtag gagagaaggt
481 cttctccagc aatgggcagt ccatcacttt tgatgccatt caggaggcat gtgccagagc
541 aggcggccgc attgctgtcc caaggaatcc agaggaaaat gaggccattg caagcttcgt
601 gaagaagtac aacacatatg cctatgtagg cctgactgag ggtcccagcc ctggagactt
661 ccgctactca gacgggaccc ctgtaaacta caccaactgg taccgagggg agcccgcagg
721 ttggggaaaa gagcagtgtg tggagatgta cacagatggg cagtggaatg acaggaactg
781 cctgtactcc cgactgacca tctgtgagtt ctgagaggca tttaggccat gggacaggga
841 ggacgctctc tggccttcgg cctccatcct gaggctccac ttggtctgtg agatgctaga
901 actccctttc aacagaattc acttgtggct attgggactg gaggcaccct tagccacttc
961 attcctctga tgggccctga ctcttcccca taatcactga ccagccttga cactcccctt
1021 gcaaaccacc cagcactgca ccccaggcag ccactcttag cattggcctt cgacatgaga
1081 tggagccctc cttattcccc atctggtcca gttccttcac ttacagatgg cagcagtgag
1141 gtcttggggt agaaggaccc tccaaagtca cacaaagtgc ctgcctcctg gtcccctcag
1201 ctccctctct gcaacccagt gccatcagga tgagcaatcc tggccaagca taatgacaga
1261 gagaggcaga cttcggggaa gccctgactg tgcagagcta aggacacagt ggagattctc
1321 tggcactctg aggtctctgt ggcaggcctg gtcaggctct ccatgaggtt agaaggccag
1381 gtagtgttcc agcagggtgg tggccaagcc aaccccatga ttgatgtgta cgattcactc
1441 ctttgagtct ttgaatggca actcagcccc ctgacctgaa gacagccagc ctaggcctct
1501 agggtgacct agagccgcct tcagatgtga cccgagtaac tttcaactga tgaacaaatc
1561 tgcaccctac ttcagatttc agtgggcatt cacatcaccc cccacaccac tggctctgct
1621 ttctcctttc attaatccat tcacccagat atttcattaa aattatcacg tgccaggtct
1681 taggatatgt cgtggggtgg gcaaggtaat cagtgacagt tgaagatttt tttttcccag
1741 agcttatgtc ttcatctgtg aaatgggaat aagatacttg ttgctgtcac agttattacc
1801 atccccccag ctaccaaaat tactaccaga actgttacta tacacagagg ctattgactg
1861 agcacctatc atttgccaag aaccttgaca agcacttcta atacagcata ttatgtacta
1921 ttcaatcttc acacaatgtc acgggaccag tattgtttcc tcatttttta taaggacact
1981 gaagcttgga ggagttaaat gttttgagta ttattccaga gagcaagtgg cagaggctgg
2041 atccaaaccc atcttcctgg acctgaagct tatgcttcca gccaccccac tcctgagctg
2101 aataaa
//