LOCUS HQ021435 2106 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A1 variant AD' 6A3 (SFTPA1) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021435
VERSION HQ021435.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2106)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2106
/db_xref="H-InvDB:HIT000652897"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2106
/gene="SFTPA1"
5'UTR 1..67
/gene="SFTPA1"
/note="AD'"
CDS 68..814
/gene="SFTPA1"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A1 variant AD' 6A3"
/protein_id="ADO27678.1"
/translation="MWLCPLALNLILMAASGAVCEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 815..2106
/gene="SFTPA1"
/note="6A3"
BASE COUNT 502 a 577 c 537 g 490 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtgggagcag cgactggacc
61 cagagccatg tggctgtgcc ctctggccct caacctcatc ttgatggcag cctctggtgc
121 tgtgtgcgaa gtgaaggacg tttgtgttgg aagccctggt atccccggca ctcctggatc
181 ccacggcctg ccaggcaggg acgggagaga tggtctcaaa ggagaccctg gccctccagg
241 ccccatgggt ccacctggag aaatgccatg tcctcctgga aatgatgggc tgcctggagc
301 ccctggtatc cctggagagt gtggagagaa gggggagcct ggcgagaggg gccctccagg
361 gcttccagct catctagatg aggagctcca agccacactc cacgacttta gacatcaaat
421 cctgcagaca aggggagccc tcagtctgca gggctccata atgacagtag gagagaaggt
481 cttctccagc aatgggcagt ccatcacttt tgatgccatt caggaggcat gtgccagagc
541 aggcggccgc attgctgtcc caaggaatcc agaggaaaat gaggccattg caagcttcgt
601 gaagaagtac aacacatatg cctatgtagg cctgactgag ggtcccagcc ctggagactt
661 ccgctactca gacgggaccc ctgtaaacta caccaactgg taccgagggg agcccgcagg
721 tcggggaaaa gagcagtgtg tggagatgta cacagatggg cagtggaatg acaggaactg
781 cctgtactcc cgactgacca tctgtgagtt ctgagaggca tttaggccat gggacaggga
841 ggacgctctc tggccttcgg cctccatcct gaggctccac ttggtctgtg agatgctaga
901 actccctttc aacagaattc acttgtggct attgggactg gaggcaccct tagccacttc
961 attcctctga tgggccctga ctcttcccca taatcactga ccagccttga cactcccctt
1021 gcaaactctc ccagcactgc accccaggca gccactctta gccttggcct tcgacatgag
1081 atggagccct ccttattccc catctggtcc agttccttca cttacagatg gcagcagtga
1141 ggtcttgggg tagaaggacc ctccaaagtc acacaaagtg cctgcctcct ggtcccctca
1201 gctctctctc tgcaacccag tgccatcagg atgagcaatc ctggccaagc ataatgacag
1261 agagaggcag acttcgggga agccctgact gtgcagagct aaggacacag tggagattct
1321 ctggcactct gaggtctctg tggcaggcct ggtcaggctc tccatgaggt tagaaggcca
1381 ggtagtgttc cagcagggtg gtggccaagc caaccccatg attgatgtgt acgattcact
1441 cctttgagtc tttgaatggc aactcagccc cctgacctga agacagccag cctaggcctc
1501 tagggtgacc tagagccgcc ttcagatgtg acccgagtaa ctttcaactg atgaacaaat
1561 ctgcacccta cttcagattt cagtgggcat tcacatcacc ccccacacca ctggctctgc
1621 tttctccttt cattaatcca ttcacccaga tatttcatta aaattatcac gtgccaggtc
1681 ttaggatatg tcgtggggtg ggcaaggtaa tcagtgacag ttgaagattt ttttttccca
1741 gagcttatgt cttcatctgt gaaatgggaa taagatactt gttgctgtca cagttattac
1801 catcccccca gctaccaaaa ttactaccag aactgttact atacacagag gctattgact
1861 gagcacctat catttgccaa gaaccttgac aagcacttct aatacagcat attatgtact
1921 attcaatctt cacacaatgt cacgggacca gtattgtttc ctcatttttt ataaggacac
1981 tgaagcttgg aggagttaaa tgttttgagt attattccag agagcaagtg gcagaggctg
2041 gatccaaacc catcttcctg gacctgaagc ttatgcttcc agcctcccac tcctgagctg
2101 aataaa
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