LOCUS HQ021432 2155 bp mRNA linear HUM 17-OCT-2010
DEFINITION Homo sapiens surfactant protein A2 variant ABD 1A (SFTPA2) mRNA,
complete cds, alternatively spliced.
ACCESSION HQ021432
VERSION HQ021432.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2155)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Human SP-A1 (SFTPA1) variant-specific 3' UTRs and poly(A) tail
differentially affect the in vitro translation of a reporter gene
JOURNAL Am. J. Physiol. Lung Cell Mol. Physiol. 299 (4), L523-L534 (2010)
PUBMED 20693318
REFERENCE 2 (bases 1 to 2155)
AUTHORS Silveyra,P., Wang,G. and Floros,J.
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2010) Pediatrics, Penn State College of Medicine,
500 University Drive, Hershey, PA 17033, USA
FEATURES Location/Qualifiers
source 1..2155
/db_xref="H-InvDB:HIT000652894"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2155
/gene="SFTPA2"
5'UTR 1..100
/gene="SFTPA2"
/note="ABD"
CDS 101..847
/gene="SFTPA2"
/note="alternatively spliced"
/codon_start=1
/product="surfactant protein A2 variant ABD 1A"
/protein_id="ADO27675.1"
/translation="MWLCPLALTLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGVKGDPGPPGPMGPPGETPCPPGNNGLPGAPGVPGERGEKGEPGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
3'UTR 848..2155
/gene="SFTPA2"
/note="1A"
BASE COUNT 514 a 608 c 549 g 484 t
ORIGIN
1 aacttggagg cagagaccca agcagctgga ggctctgtgt gtgggtcgct gatttcttgg
61 agcctgaaaa gaagcaggag cagcgactgg acccagagcc atgtggctgt gccctctggc
121 cctcaccctc atcttgatgg cagcctctgg tgctgcgtgc gaagtgaagg acgtttgtgt
181 tggaagccct ggtatccccg gcactcctgg atcccacggc ctgccaggca gggacgggag
241 agatggtgtc aaaggagacc ctggccctcc aggccccatg ggtccgcctg gagaaacacc
301 atgtcctcct gggaataatg ggctgcctgg agcccctggt gtccctggag agcgtggaga
361 gaagggggag cctggcgaga gaggccctcc agggcttcca gctcatctag atgaggagct
421 ccaagccaca ctccacgact tcagacatca aatcctgcag acaaggggag ccctcagtct
481 gcagggctcc ataatgacag taggagagaa ggtcttctcc agcaatgggc agtccatcac
541 ttttgatgcc attcaggagg catgtgccag agcaggcggc cgcattgctg tcccaaggaa
601 tccagaggaa aatgaggcca ttgcaagctt cgtgaagaag tacaacacat atgcctatgt
661 aggcctgact gagggtccca gccctggaga cttccgctac tcagatggga cccctgtaaa
721 ctacaccaac tggtaccgag gggagcctgc aggtcgggga aaagagcagt gtgtggagat
781 gtacacagat gggcagtgga atgacaggaa ctgcctgtac tcccgactga ccatctgtga
841 gttctgagag gcatttaggc catgggacag ggaggatcct gtctggcctt cagtttccat
901 ccccaggatc cacttggtct gtgagatgct agaactccct ttcaacagaa ttcacttgtg
961 gctattagag ctggaggcac ccttagccac ttcattcccc tgatgggccc tgactcttcc
1021 ccataatcac tgaccagcct tgacactccc cttgcaaacc atcccagcac tgcaccccag
1081 gcagccactc ctagccttgg cctttggcat gagatggagg cctccttatt ccccatctgg
1141 tccagttcct tcacttacag atggcagcag tgaggccttg gggtagaagg atcctccaaa
1201 gtcacacaga gtgcctgcct cctggtcccc tcagctctgc ctctgcagcc cactgcctgc
1261 ccagtgccat caggatgagc agtcccggcc aagcataatg acagagagag gcagatttca
1321 gggaagccct gactgtgtat agctaaggac acagtataga ttctctggca ctctgaggtc
1381 tctgtggcag gcctggtcag gctctccagg tggtcagagg gcccagtggt gccccagcac
1441 ggtggtgccc aagccaaccc tgtgactgac atgtacgatt cactcctttg agtctttgga
1501 tgccaactca gccccctgac ctggaggcag ccggccaagg cctctaggga agagcccccc
1561 actgcagaca tgacccgagt aactttccgc tgatgaacaa atctgcaccc cacttcagac
1621 ctcggtgggc attcacacca ccccccatgc caccggctcc actttcccct tttattaata
1681 cattcaccca gataatcatt aaaattaaca tgtgccaggt cttaggatgt gtcttggggt
1741 gggcacagca cccggtgact cttggggata tttatttatt ttccctgagc ctatatcttc
1801 atctgtgaaa tggggataaa aatacttgtt gctgtcacaa ttattaccat ctctccagct
1861 agcaaaatta ctaccagagc cgttactaca cacaaaggct attgaccgag cacataccat
1921 gtgccacaca ccttgacaaa atcttttaat acagtttatt atgtactatt caatctttac
1981 acaatgtcac gggaccagta ttgtttaccc aattttttat aaggacactg aagcttagag
2041 gagtgaaatg ttttgagtgt tatttcagag agcaaatggc aaagactgga tccaaaccca
2101 tcttcctgga cctgaagttc atgctcccag ccaccccacc cctgagctga ataaa
//