LOCUS HM151899 8401 bp mRNA linear HUM 15-JUN-2010 DEFINITION Homo sapiens desmoplakin Ia mRNA, complete cds, alternatively spliced. ACCESSION HM151899 VERSION HM151899.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 8401) AUTHORS Cabral,R.M., Wan,H., Cole,C.L., Abrams,D.J., Kelsell,D.P. and South,A.P. TITLE Identification and characterization of DSPIa, a novel isoform of human desmoplakin JOURNAL Cell Tissue Res. 341 (1), 121-129 (2010) PUBMED 20524011 REFERENCE 2 (bases 1 to 8401) AUTHORS Cabral,R.M., Wan,H., Cole,C.L., Abrams,D.J., Kelsell,D.P. and South,A.P. TITLE Direct Submission JOURNAL Submitted (27-APR-2010) Centre For Oncology and Molecular Medicine, University of Dundee, Ninewells Hospital and Medical School, Dundee DD1 9SY, United Kingdom FEATURES Location/Qualifiers source 1..8401 /db_xref="H-InvDB:HIT000649215" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" CDS 280..7566 /note="minor isoform of desmoplakin; intermediate in size between desmoplakin I and desmoplakin II; alternatively spliced" /codon_start=1 /product="desmoplakin Ia" /protein_id="ADI58529.1" /translation="MSCNGGSHPRINTLGRMIRAESGPDLRYEVTSGGGGTSRMYYSR RGVITDQNSDGYCQTGTMSRHQNQNTIQELLQNCSDCLMRAELIVQPELKYGDGIQLT RSRELDECFAQANDQMEILDSLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPR VRRASSKGGGGYTCQSGSGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHI NSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNII QATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESD QLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYL KGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKP RNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSV GLIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIA KLKTMRQEDYMKTIADLELHYQEFIRNSQGSEMFGDDDKRKIQSQFTDAQKHYQTLVI QLPGYPQHQTVTTTEITHHGTCQDVNHNKVIETNRENDKQETWMLMELQKIRRQIEHC EGRMTLKNLPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGSEKYC YLQNEVFGLFQKLENINGVTDGYLNSLCTVRALLQAILQTEDMLKVYEARLTEEETVC LDLDKVEAYRCGLKKIKNDLNLKKSLLATMKTELQKAQQIHSQTSQQYPLYDLDLGKF GEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNYRDNYQAFCKWLYDAKRRQDSLES MKFGDSNTVMRFLNEQKNLHSEISGKRDKSEEVQKIAELCANSIKDYELQLASYTSGL ETLLNIPIKRTMIQSPSGVILQEAADVHARYIELLTRSGDYYRFLSEMLKSLEDLKLK NTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAECSQFKAKLASLEELKRQAEL DGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKSVEDRFDQQKNDYDQLQKAR QCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKREYENELAKVRNHYNEEMS NLRNKYETEINITKTTIKEISMQKEDDSKNLRNQLDRLSRENRDLKDEIVRLNDSILQ ATEQRRRAEENALQQKACGSEIMQKKQHLEIELKQVMQQRSEDNARHKQSLEEAAKTI QDKNKEIERLKAEFQEEAKRRWEYENELSKASNRIQESKNQCTQVVQERESLLVKIKV LEQDKARLQRLEDELNRAKSTLEAETRVKQRLECEKQQIQNDLNQWKTQYSRKEEAIR KIESEREKSEREKNSLRSEIERLQAEIKRIEERCRRKLEDSTRETQSQLETERSRYQR EIDKLRQRPYGSHRETQTECEWTVDTSKLVFDGLRKKVTAMQLYECQLIDKTTLDKLL KGKKSVEEVASEIQPFLRGAGSIAGASASPKEKYSLVEAKRKKLISPESTVMLLEAQA ATGGIIDPHRNEKLTVDSAIARDLIDFDDRQQIYAAEKAITGFDDPFSGKTVSVSEAI KKNLIDRETGMRLLEAQIASGGVVDPVNSVFLPKDVALARGLIDRDLYRSLNDPRDSQ KNFVDPVTKKKVSYVQLKERCRIEPHTGLLLLSVQKRSMSFQGIRQPVTVTELVDSGI LRPSTVNELESGQISYDEVGERIKDFLQGSSCIAGIYNETTKQKLGIYEAMKIGLVRP GTALELLEAQAATGFIVDPVSNLRLPVEEAYKRGLVGIEFKEKLLSAERAVTGYNDPE TGNIISLFQAMNKELIEKGHGIRLLEAQIATGGIIDPKESHRLPVDIAYKRGYFNEEL SEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLKEKKKQVQTSQKN TLRKRRVVIVDPETNKEMSVQEAYKKGLIDYETFKELCEQECEWEEITITGSDGSTRV VLVDRKTGSQYDIQDAIDKGLVDRKFFDQYRSGSLSLTQFADMISLKNGVGTSSSMGS GVSDDVFSSSRHESVSKISTISSVRNLTIRSSSFSDTLEESSPIAAIFDTENLEKISI TEGIERGIVDSITGQRLLEAQACTGGIIHPTTGQKLSLQDAVSQGVIDQDMATRLKPA QKAFIGFEGVKGKKKMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRISTEE AIRKGFIDGRAAQRLQDTSSYAKILTCPKTKLKISYKDAINRSMVEDITGLRLLEAAS VSSKGLPSPYNMSSAPGSRSGSRSGSRSGSRSGSRSGSRRGSFDATGNSSYSYSYSFS SSSIGH" BASE COUNT 2538 a 1884 c 2115 g 1864 t ORIGIN 1 ccgaccaaca ccaacaccca gctccgacgc agctcctctg cgcccttgcc gccctccgag 61 ccacagcttt cctcccgctc ctgcccccgg cccgtcgccg tctccgcgct cgcagcggcc 121 tcgggagggc ccaggtagcg agcagcgacc tcgcgagcct tccgcactcc cgcccggttc 181 cccggccgtc cgcctatcct tggccccctc cgctttctcc gcgccggccc gcctcgctta 241 tgcctcggcg ctgagccgct ctcccgattg cccgccgaca tgagctgcaa cggaggctcc 301 cacccgcgga tcaacactct gggccgcatg atccgcgccg agtctggccc ggacctgcgc 361 tacgaggtga ccagcggcgg cgggggcacc agcaggatgt actattctcg gcgcggcgtg 421 atcaccgacc agaactcgga cggctactgt caaaccggca cgatgtccag gcaccagaac 481 cagaacacca tccaggagct gctgcagaac tgctccgact gcttgatgcg agcagagctc 541 atcgtgcagc ctgaattgaa gtatggagat ggaatacaac tgactcggag tcgagaattg 601 gatgagtgtt ttgcccaggc caatgaccaa atggaaatcc tcgacagctt gatcagagag 661 atgcggcaga tgggccagcc ctgtgatgct taccagaaaa ggcttcttca gctccaagag 721 caaatgcgag ccctttataa agccatcagt gtccctcgag tccgcagggc cagctccaag 781 ggtggtggag gctacacttg tcagagtggc tctggctggg atgagttcac caaacatgtc 841 accagtgaat gtttggggtg gatgaggcag caaagggcgg agatggacat ggtggcctgg 901 ggtgtggacc tggcctcagt ggagcagcac attaacagcc accggggcat ccacaactcc 961 atcggcgact atcgctggca gctggacaaa atcaaagccg acctgcgcga gaaatctgcg 1021 atctaccagt tggaggagga gtatgaaaac ctgctgaaag cgtcctttga gaggatggat 1081 cacctgcgac agctgcagaa catcattcag gccacgtcca gggagatcat gtggatcaat 1141 gactgcgagg aggaggagct gctgtacgac tggagcgaca agaacaccaa catcgctcag 1201 aaacaggagg ccttctccat acgcatgagt caactggaag ttaaagaaaa agagctcaat 1261 aagctgaaac aagaaagtga ccaacttgtc ctcaatcagc atccagcttc agacaaaatt 1321 gaggcctata tggacactct gcagacgcag tggagttgga ttcttcagat caccaagtgc 1381 attgatgttc atctgaaaga aaatgctgcc tactttcagt tttttgaaga ggcgcagtct 1441 actgaagcat acctgaaggg gctccaggac tccatcagga agaagtaccc ctgcgacaag 1501 aacatgcccc tgcagcacct gctggaacag atcaaggagc tggagaaaga acgagagaaa 1561 atccttgaat acaagcgtca ggtgcagaac ttggtaaaca agtctaagaa gattgtacag 1621 ctgaagcctc gtaacccaga ctacagaagc aataaaccca ttattctcag agctctctgt 1681 gactacaaac aagatcagaa aatcgtgcat aagggggatg agtgtatcct gaaggacaac 1741 aacgagcgca gcaagtggta cgtgacgggc ccgggaggcg ttgacatgct tgttccctct 1801 gtggggctga tcatccctcc tccgaaccca ctggccgtgg acctctcttg caagattgag 1861 cagtactacg aagccatctt ggctctgtgg aaccagctct acatcaacat gaagagcctg 1921 gtgtcctggc actactgcat gattgacata gagaagatca gggccatgac aatcgccaag 1981 ctgaaaacaa tgcggcagga agattacatg aagacgatag ccgaccttga gttacattac 2041 caagagttca tcagaaatag ccaaggctca gagatgtttg gagatgatga caagcggaaa 2101 atacagtctc agttcaccga tgcccagaag cattaccaga ccctggtcat tcagctccct 2161 ggctatcccc agcaccagac agtgaccaca actgaaatca ctcatcatgg aacctgccaa 2221 gatgtcaacc ataataaagt aattgaaacc aacagagaaa atgacaagca agaaacatgg 2281 atgctgatgg agctgcagaa gattcgcagg cagatagagc actgcgaggg caggatgact 2341 ctcaaaaacc tccctctagc agaccagggg tcttctcacc acatcacagt gaaaattaac 2401 gagcttaaga gtgtgcagaa tgattcacaa gcaattgctg aggttctcaa ccagcttaaa 2461 gatatgcttg ccaacttcag aggttctgaa aagtactgct atttacagaa tgaagtattt 2521 ggactatttc agaaactgga aaatatcaat ggtgttacag atggctactt aaatagctta 2581 tgcacagtaa gggcactgct ccaggctatt ctccaaacag aagacatgtt aaaggtttat 2641 gaagccaggc tcactgagga ggaaactgtc tgcctggacc tggataaagt ggaagcttac 2701 cgctgtggac tgaagaaaat aaaaaatgac ttgaacttga agaagtcgtt gttggccact 2761 atgaagacag aactacagaa agcccagcag atccactctc agacttcaca gcagtatcca 2821 ctttatgatc tggacttggg caagttcggt gaaaaagtca cacagctgac agaccgctgg 2881 caaaggatag ataaacagat cgactttagg ttatgggacc tggagaaaca aatcaagcaa 2941 ttgaggaatt atcgtgataa ctatcaggct ttctgcaagt ggctctatga tgctaaacgc 3001 cgccaggatt ccttagaatc catgaaattt ggagattcca acacagtcat gcggtttttg 3061 aatgagcaga agaacttgca cagtgaaata tctggcaaac gagacaaatc agaggaagta 3121 caaaaaattg ctgaactttg cgccaattca attaaggatt atgagctcca gctggcctca 3181 tacacctcag gactggaaac tctgctgaac atacctatca agaggaccat gattcagtcc 3241 ccttctgggg tgattctgca agaggctgca gatgttcatg ctcggtacat tgaactactt 3301 acaagatctg gagactatta caggttctta agtgagatgc tgaagagttt ggaagatctg 3361 aagctgaaaa ataccaagat cgaagttttg gaagaggagc tcagactggc ccgagatgcc 3421 aactcggaaa actgtaataa gaacaaattc ctggatcaga acctgcagaa ataccaggca 3481 gagtgttccc agttcaaagc gaagcttgcg agcctggagg agctgaagag acaggctgag 3541 ctggatggga agtcggctaa gcaaaatcta gacaagtgct acggccaaat aaaagaactc 3601 aatgagaaga tcacccgact gacttatgag attgaagatg aaaagagaag aagaaaatct 3661 gtggaagaca gatttgacca acagaagaat gactatgacc aactgcagaa agcaaggcaa 3721 tgtgaaaagg agaaccttgg ttggcagaaa ttagagtctg agaaagccat caaggagaag 3781 gagtacgaga ttgaaaggtt gagggttcta ctgcaggaag aaggcacccg gaagagagaa 3841 tatgaaaatg agctggcaaa ggtaagaaac cactataatg aggagatgag taatttaagg 3901 aacaagtatg aaacagagat taacattacg aagaccacca tcaaggagat atccatgcaa 3961 aaagaggatg attccaaaaa tcttagaaac cagcttgata gactttcaag ggaaaatcga 4021 gatctgaagg atgaaattgt caggctcaat gacagcatct tgcaggccac tgagcagcga 4081 aggcgagctg aagaaaacgc ccttcagcaa aaggcctgtg gctctgagat aatgcagaag 4141 aagcagcatc tggagataga actgaagcag gtcatgcagc agcgctctga ggacaatgcc 4201 cggcacaagc agtccctgga ggaggctgcc aagaccattc aggacaaaaa taaggagatc 4261 gagagactca aagctgagtt tcaggaggag gccaagcgcc gctgggaata tgaaaatgaa 4321 ctgagtaagg catctaatag gattcaggaa tcaaagaatc agtgtactca ggtggtacag 4381 gaaagagaga gccttctggt gaaaatcaaa gtcctggagc aagacaaggc aaggctgcag 4441 aggctggagg atgagctgaa tcgtgcaaaa tcaactctag aggcagaaac cagggtgaaa 4501 cagcgcctgg agtgtgagaa acagcaaatt cagaatgacc tgaatcagtg gaagactcaa 4561 tattcccgca aggaggaggc tattaggaag atagaatcgg aaagagaaaa gagtgagaga 4621 gagaagaaca gtcttaggag tgagatcgaa agactccaag cagagatcaa gagaattgaa 4681 gagaggtgca ggcgtaagct ggaggattct accagggaga cacagtcaca gttagaaaca 4741 gaacgctccc gatatcagag ggagattgat aaactcagac agcgcccata tgggtcccat 4801 cgagagaccc agactgagtg tgagtggacc gttgacacct ccaagctggt gtttgatggg 4861 ctgaggaaga aggtgacagc aatgcagctc tatgagtgtc agctgatcga caaaacaacc 4921 ttggacaaac tattgaaggg gaagaagtca gtggaagaag ttgcttctga aatccagcca 4981 ttccttcggg gtgcaggatc tatcgctgga gcatctgctt ctcctaagga aaaatactct 5041 ttggtagagg ccaagagaaa gaaattaatc agcccagaat ccacagtcat gcttctggag 5101 gcccaggcag ctacaggtgg tataattgat ccccatcgga atgagaagct gactgtcgac 5161 agtgccatag ctcgggacct cattgacttc gatgaccgtc agcagatata tgcagcagaa 5221 aaagctatca ctggttttga tgatccattt tcaggcaaga cagtatctgt ttcagaagcc 5281 atcaagaaaa atttgattga tagagaaacc ggaatgcgcc tgctggaagc ccagattgct 5341 tcagggggtg tagtagaccc tgtgaacagt gtctttttgc caaaagatgt cgccttggcc 5401 cgggggctga ttgatagaga tttgtatcga tccctgaatg atccccgaga tagtcagaaa 5461 aactttgtgg atccagtcac caaaaagaag gtcagttacg tgcagctgaa ggaacggtgc 5521 agaatcgaac cacatactgg tctgctcttg ctttcagtac agaagagaag catgtccttc 5581 caaggaatca gacaacctgt gaccgtcact gagctagtag attctggtat attgagaccg 5641 tccactgtca atgaactgga atctggtcag atttcttatg acgaggttgg tgagagaatt 5701 aaggacttcc tccagggttc aagctgcata gcaggcatat acaatgagac cacaaaacag 5761 aagcttggca tttatgaggc catgaaaatt ggcttagtcc gacctggtac tgctctggag 5821 ttgctggaag cccaagcagc tactggcttt atagtggatc ctgttagcaa cttgaggtta 5881 ccagtggagg aagcctacaa gagaggtctg gtgggcattg agttcaaaga gaagctcctg 5941 tctgcagaac gagctgtcac tgggtataat gatcctgaaa caggaaacat catctctttg 6001 ttccaagcca tgaataagga actcatcgaa aagggccacg gtattcgctt attagaagca 6061 cagatcgcaa ccggggggat cattgaccca aaggagagcc atcgtttacc agttgacata 6121 gcatataaga ggggctattt caatgaggaa ctcagtgaga ttctctcaga tccaagtgat 6181 gataccaaag gattttttga ccccaacact gaagaaaatc ttacctatct gcaactaaaa 6241 gaaagatgca ttaaggatga ggaaacaggg ctctgtcttc tgcctctgaa agaaaagaag 6301 aaacaggtgc agacatcaca aaagaatacc ctcaggaagc gtagagtggt catagttgac 6361 ccagaaacca ataaagaaat gtctgttcag gaggcctaca agaagggcct aattgattat 6421 gaaaccttca aagaactgtg tgagcaggaa tgtgaatggg aagaaataac catcacggga 6481 tcagatggct ccaccagggt ggtcctggta gatagaaaga caggcagtca gtatgatatt 6541 caagatgcta ttgacaaggg ccttgttgac aggaagttct ttgatcagta ccgatccggc 6601 agcctcagcc tcactcaatt tgctgacatg atctccttga aaaatggtgt cggcaccagc 6661 agcagcatgg gcagtggtgt cagcgatgat gtttttagca gctcccgaca tgaatcagta 6721 agtaagattt ccaccatatc cagcgtcagg aatttaacca taaggagcag ctctttttca 6781 gacaccctgg aagaatcgag ccccattgca gccatctttg acacagaaaa cctggagaaa 6841 atctccatta cagaaggtat agagcggggc atcgttgaca gcatcacggg tcagaggctt 6901 ctggaggctc aggcctgcac aggtggcatc atccacccaa ccacgggcca gaagctgtca 6961 cttcaggacg cagtctccca gggtgtgatt gaccaagaca tggccaccag gctgaagcct 7021 gctcagaaag ccttcatagg cttcgagggt gtgaagggaa agaagaagat gtcagcagca 7081 gaggcagtga aagaaaaatg gctcccgtat gaggctggcc agcgcttcct ggagttccag 7141 tacctcacgg gaggtcttgt tgacccggaa gtgcatggga ggataagcac cgaagaagcc 7201 atccggaagg ggttcataga tggccgcgcc gcacagaggc tgcaagacac cagcagctat 7261 gccaaaatcc tgacctgccc caaaaccaaa ttaaaaatat cctataagga tgccataaat 7321 cgctccatgg tagaagatat cactgggctg cgccttctgg aagccgcctc cgtgtcgtcc 7381 aagggcttac ccagccctta caacatgtct tcggctccgg ggtcccgctc cggctcccgc 7441 tcgggatctc gctccggatc tcgctccggg tcccgcagtg ggtcccggag aggaagcttt 7501 gacgccacag ggaattcttc ctactcttat tcctactcat ttagcagtag ttctattggg 7561 cactagtagt cagttgggag tggttgctat accttgactt catttatatg aatttccact 7621 ttattaaata atagaaaaga aaatcccggt gcttgcagta gagtgatagg acattctatg 7681 cttacagaaa atatagccat gattgaaatc aaatagtaaa ggctgttctg gctttttatc 7741 ttcttagctc atcttaaata agcagtacac ttggatgcag tgcgtctgaa gtgctaatca 7801 gttgtaacaa tagcacaaat cgaacttagg atttgtttct tctcttctgt gtttcgattt 7861 ttgatcaatt ctttaatttt ggaagcctat aatacagttt tctattcttg gagataaaaa 7921 ttaaatggat cactgatatt ttagtcattc tgcttctcat ctaaatattt ccatattctg 7981 tattaggaga aaattaccct cccagcacca gcccccctct caaaccccca acccaaaacc 8041 aagcattttg gaatgagtct cctttagttt cagagtgtgg attgtataac ccatatactc 8101 ttcgatgtac ttgtttggtt tggtattaat ttgactgtgc atgacagcgg caatcttttc 8161 tttggtcaaa gttttctgtt tattttgctt gtcatattcg atgtacttta aggtgtcttt 8221 atgaagtttg ctattctggc aataaacttt tagacttttg aagtgtttgt gttttaattt 8281 aatatgttta taagcatgta taaacattta gcatattttt atcataggtc taaaaatatt 8341 tgtttactaa atacctgtga agaaatacca ttaaaaaact atttggttct gaattcttac 8401 t //