LOCUS HM116555 1820 bp mRNA linear HUM 31-AUG-2010
DEFINITION Homo sapiens HNF1 beta A splice variant 3 (HNF1B) mRNA, complete
cds, alternatively spliced.
ACCESSION HM116555
VERSION HM116555.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Yang,C.-W. and Tsai,D.-Y.
TITLE Homo sapiens HNF1 beta A mRNA splicing variant 3
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1820)
AUTHORS Yang,C.-W. and Tsai,D.-Y.
TITLE Direct Submission
JOURNAL Submitted (12-APR-2010) Department of Microbiology, Soochow
University, No.70, Linxi Rd., Taipei 111, Taiwan, ROC
FEATURES Location/Qualifiers
source 1..1820
/db_xref="H-InvDB:HIT000649195"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="17"
/map="17q12"
/cell_line="HepG2"
/PCR_primers="fwd_seq: ggggagtaacaggtgtctggag, rev_seq:
gtcaggtaagcagggacctctc"
gene 1..1820
/gene="HNF1B"
CDS 135..1412
/gene="HNF1B"
/note="transcription factor; alternatively spliced"
/codon_start=1
/product="HNF1 beta A splice variant 3"
/protein_id="ADM43492.1"
/translation="MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLE
TLPLSPGSGAEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEE
AAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPM
KTQKRAALYTWYVRKQREILRQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSHGPGQ
SDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQR
GVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNPLLSHGS
PHHQPSSSPPNKLSGVRYSQQGNNEITSSSTISHHGNSAMVTSQSVLQQVSPASLDPG
HNLLSPDGKMDLSLRRRFAPSQHLDEYPQPLPP"
BASE COUNT 429 a 610 c 462 g 319 t
ORIGIN
1 ggggagtaac aggtgtctgg aggctgaagg gtggaggggt tcctggattt ggggtttgct
61 tgtgaaactc ccctccaccc tcctctctcg cacccaccca ccccctcacc cccttctttt
121 tccgtccttg gaaaatggtg tccaagctca cgtcgctcca gcaagaactc ctgagcgccc
181 tgctgagctc cggggtcacc aaggaggtgc tggttcaggc cttggaggag ttgctgccat
241 ccccgaactt cggggtgaag ctggagacgc tgcccctgtc ccctggcagc ggggccgagc
301 ccgacaccaa gccggtcttc catactctca ccaacggcca cgccaagggc cgcttgtccg
361 gcgacgaggg ctccgaggac ggcgacgact atgacacacc tcccatcctc aaggagctgc
421 aggcgctcaa caccgaggag gcggcggagc agcgggcgga ggtggaccgg atgctcagtg
481 aggacccttg gagggctgct aaaatgatca agggttacat gcagcaacac aacatccccc
541 agagggaggt ggtcgatgtc accggcctga accagtcgca cctctcccag catctcaaca
601 agggcacccc tatgaagacc cagaagcgtg ccgctctgta cacctggtac gtcagaaagc
661 aacgagagat cctccgacaa ttcaaccaga cagtccagag ttctggaaat atgacagaca
721 aaagcagtca ggatcagctg ctgtttctct ttccagagtt cagtcaacag agccatgggc
781 ctgggcagtc cgatgatgcc tgctctgagc ccaccaacaa gaagatgcgc cgcaaccggt
841 tcaaatgggg gcccgcgtcc cagcaaatct tgtaccaggc ctacgatcgg caaaagaacc
901 ccagcaagga agagagagag gccttagtgg aggaatgcaa cagggcagaa tgtttgcagc
961 gaggggtgtc cccctccaaa gcccacggcc tgggctccaa cttggtcact gaggtccgtg
1021 tctacaactg gtttgcaaac cgcaggaagg aggaggcatt ccggcaaaag ctggccatgg
1081 acgcctatag ctccaaccag actcacagcc tgaaccctct gctctcccac ggctcccccc
1141 accaccagcc cagctcctct cctccaaaca agctgtcagg agtgcgctac agccagcagg
1201 gaaacaatga gatcacttcc tcctcaacaa tcagtcacca tggcaacagc gccatggtga
1261 ccagccagtc ggttttacag caagtctccc cagccagcct ggacccaggc cacaatctcc
1321 tctcacctga tggtaaaatg gatctcagtc tcaggaggag gtttgccccc agtcagcacc
1381 ttgacgaata tccacagcct ctcccaccat aatccccagc aatctcaaaa cctcatcatg
1441 acacccctct ctggagtcat ggcaattgca caaagcctca acacctccca agcacagagt
1501 gtccctgtca tcaacagtgt ggccggcagc ctggcagccc tgcagcccgt ccagttctcc
1561 cagcagctgc acagccctca ccagcagccc ctcatgcagc agagcccagg cagccacatg
1621 gcccagcagc ccttcatggc agctgtgact cagctgcaga actcacacat gtcctctaca
1681 agcctggtga tgcccacaca ccacttactt cgtgcgcaac aacaaggacc ctgttttcca
1741 caccatcacc ctctgggcag ctgtcatgga aaagcccagt gacctgaccg gcacctgcga
1801 gaggtccctg cttacctgac
//