LOCUS HE659518 1591 bp mRNA linear HUM 17-JUL-2012
DEFINITION Homo sapiens partial mRNA for tumor necrosis factor receptor
superfamily, member 11a, NFKB activator (TNFRSF11A gene), splice
variant exon9a.
ACCESSION HE659518
VERSION HE659518.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1591)
AUTHORS Papanastasiou A.
JOURNAL Submitted (28-JAN-2012) to the INSDC. Medical School, Univeristy of
Patras, Rion, Panepistimioupolis, 26500, GREECE.
REFERENCE 2
AUTHORS Papanastasiou A.D., Sirinian C., Kalofonos H.P.
TITLE A novel exon (exon 9a) in the coding sequence of the human
TNFRSF11A gene
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..1591
/db_xref="H-InvDB:HIT000714884"
/organism="Homo sapiens"
/mol_type="mRNA"
/tissue_type="blood"
/db_xref="taxon:9606"
CDS <1..1098
/codon_start=1
/gene="TNFRSF11A"
/product="tumor necrosis factor receptor superfamily,
member 11a, NFKB activator"
/note="splice variant exon9a"
/db_xref="GOA:Q9Y6Q6"
/db_xref="HGNC:HGNC:11908"
/db_xref="InterPro:IPR001368"
/db_xref="InterPro:IPR022323"
/db_xref="InterPro:IPR022361"
/db_xref="InterPro:IPR034040"
/db_xref="InterPro:IPR041648"
/db_xref="PDB:1LB5"
/db_xref="UniProtKB/Swiss-Prot:Q9Y6Q6"
/protein_id="CCF77738.1"
/translation="FSDAFSSTDKCRPWTNCTFLGKRVEHHGTEKSDAVCSSSLPARK
PPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKKGKALTANLWHWINEACGRLSGD
KESSGDSCVSTHTANFGQQGACEGVLLLTLEEKTFPEDMCYPDQGGVCQGTCVGGGPY
AQGEDARMLSLVSKTEIEEDSFRQMPTEDEYMDRPSQPTDQLLFLTEPGSKSTPPFSE
PLEVGENDSLSQCFTGTQSTVGSESCNCTEPLCRTDWTPMSSENYLQKEVDSGHCPHW
AASPSPNWADVCTGCRNPPGEDCEPLVGSPKRGPLPQCAYGMGLPPEEEASRTEARDQ
PEDGADGRLPSSARAGAGSGSSPGGQSPASD"
BASE COUNT 363 a 456 c 469 g 303 t
ORIGIN
1 ttctctgatg ccttttcctc cacggacaaa tgcagaccct ggaccaactg taccttcctt
61 ggaaagagag tagaacatca tgggacagag aaatccgatg cggtttgcag ttcttctctg
121 ccagctagaa aaccaccaaa tgaaccccat gtttacttgc ccggtttaat aattctgctt
181 ctcttcgcgt ctgtggccct ggtggctgcc atcatctttg gcgtttgcta taggaaaaaa
241 gggaaagcac tcacagctaa tttgtggcac tggatcaatg aggcttgtgg ccgcctaagt
301 ggagataagg agtcctcagg tgacagttgt gtcagtacac acacggcaaa ctttggtcag
361 cagggagcat gtgaaggtgt cttactgctg actctggagg agaagacatt tccagaagat
421 atgtgctacc cagatcaagg tggtgtctgt cagggcacat gtgtaggagg tggtccctac
481 gcacaaggcg aagatgccag gatgctctca ttggtcagca agaccgagat agaggaagac
541 agcttcagac agatgcccac agaagatgaa tacatggaca ggccctccca gcccacagac
601 cagttactgt tcctcactga gcctggaagc aaatccacac ctcctttctc tgaacccctg
661 gaggtggggg agaatgacag tttaagccag tgcttcacgg ggacacagag cacagtgggt
721 tcagaaagct gcaactgcac tgagcccctg tgcaggactg attggactcc catgtcctct
781 gaaaactact tgcaaaaaga ggtggacagt ggccattgcc cgcactgggc agccagcccc
841 agccccaact gggcagatgt ctgcacaggc tgccggaacc ctcctgggga ggactgtgaa
901 cccctcgtgg gttccccaaa acgtggaccc ttgccccagt gcgcctatgg catgggcctt
961 ccccctgaag aagaagccag caggacggag gccagagacc agcccgagga tggggctgat
1021 gggaggctcc caagctcagc gagggcaggt gccgggtctg gaagctcccc tggtggccag
1081 tcccctgcat ctgattaacc cacacccgcc caggaagctg actgaagccc atagcacact
1141 gattattcac aactcttggg tcactctgga atacccagac ccttctgctg ccacctgctg
1201 aatggccatg ttttctaaag tccatgggtg ctcccagttc tgaaatgtga ctggaaacag
1261 taactccacg ttcatctcca gcgggcaggt gatgaacttc aagggcgaca tcatcgtggt
1321 ctacgtcagc cagacctcgc aggagggcgc ggcggcggct gcggagccca tgggccgccc
1381 ggtgcaggag gagaccctgg cgcgccgaga ctccttcgcg gggaacggcc cgcgcttccc
1441 ggacccgtgc ggcggccccg aggggctgcg ggagccggag aaggcctcga ggccggtgca
1501 ggagcaaggc ggggccaagg cttgagcgcc ccccatggct gggagcccga agctcggagc
1561 cagggctcgc gagggcagca ccgcagcctc t
//