LOCUS HE647782 1236 bp mRNA linear HUM 17-JUN-2012 DEFINITION Homo sapiens partial mRNA for tumor necrosis factor receptor superfamily, member 11a, NFKB activator (TNFRSF11A gene), splice variant delta9. ACCESSION HE647782 VERSION HE647782.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1236) AUTHORS Papanastasiou A. JOURNAL Submitted (17-DEC-2011) to the INSDC. Medical School, Univeristy of Patras, Rion, Panepistimioupolis, 26500, GREECE. REFERENCE 2 AUTHORS Papanastasiou A.D., Sirinian C., Kalofonos H.P. TITLE Alternative splicing generates multiple human TNFRSF11A (RANK) isoforms JOURNAL Unpublished. FEATURES Location/Qualifiers source 1..1236 /db_xref="H-InvDB:HIT000714869" /organism="Homo sapiens" /mol_type="mRNA" /tissue_type="blood" /db_xref="taxon:9606" CDS 27..818 /gene="TNFRSF11A" /gene_synonym="RANK" /product="tumor necrosis factor receptor superfamily, member 11a, NFKB activator" /note="splice variant delta9" /db_xref="GOA:Q9Y6Q6" /db_xref="HGNC:HGNC:11908" /db_xref="InterPro:IPR001368" /db_xref="InterPro:IPR022323" /db_xref="InterPro:IPR022361" /db_xref="InterPro:IPR034040" /db_xref="InterPro:IPR041648" /db_xref="PDB:1LB5" /db_xref="UniProtKB/Swiss-Prot:Q9Y6Q6" /protein_id="CCF23032.1" /translation="MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTSEKHYEHLG RCCNKCEPGKYMSSKCTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVV AGNSTTPRRCACTAGYHWSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFS DAFSSTDKCRPWTNCTFLGKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILL LFASVALVAAIIFGVCYRKKGKALTANLWHWINEACGRLSGDKEM" BASE COUNT 247 a 380 c 378 g 231 t ORIGIN 1 cggcgcccgc cagcctgtcc cgcgccatgg ccccgcgcgc ccggcggcgc cgcccgctgt 61 tcgcgctgct gctgctctgc gcgctgctcg cccggctgca ggtggctttg cagatcgctc 121 ctccatgtac cagtgagaag cattatgagc atctgggacg gtgctgtaac aaatgtgaac 181 caggaaagta catgtcttct aaatgcacta ctacctctga cagtgtatgt ctgccctgtg 241 gcccggatga atacttggat agctggaatg aagaagataa atgcttgctg cataaagttt 301 gtgatacagg caaggccctg gtggccgtgg tcgccggcaa cagcacgacc ccccggcgct 361 gcgcgtgcac ggctgggtac cactggagcc aggactgcga gtgctgccgc cgcaacaccg 421 agtgcgcgcc gggcctgggc gcccagcacc cgttgcagct caacaaggac acagtgtgca 481 aaccttgcct tgcaggctac ttctctgatg ccttttcctc cacggacaaa tgcagaccct 541 ggaccaactg taccttcctt ggaaagagag tagaacatca tgggacagag aaatccgatg 601 cggtttgcag ttcttctctg ccagctagaa aaccaccaaa tgaaccccat gtttacttgc 661 ccggtttaat aattctgctt ctcttcgcgt ctgtggccct ggtggctgcc atcatctttg 721 gcgtttgcta taggaaaaaa gggaaagcac tcacagctaa tttgtggcac tggatcaatg 781 aggcttgtgg ccgcctaagt ggagataagg aaatgtgact ggaaacagta actccacgtt 841 catctccagc gggcaggtga tgaacttcaa gggcgacatc atcgtggtct acgtcagcca 901 gacctcgcag gagggcgcgg cggcggctgc ggagcccatg ggccgcccgg tgcaggagga 961 gaccctggcg cgccgagact ccttcgcggg gaacggcccg cgcttcccgg acccgtgcgg 1021 cggccccgag gggctgcggg agccggagaa ggcctcgagg ccggtgcagg agcaaggcgg 1081 ggccaaggct tgagcgcccc ccatggctgg gagcccgaag ctcggagcca gggctcgcga 1141 gggcagcacc gcagcctctg ccccagcccc ggccacccag ggatcgatcg gtacagtcga 1201 ggaagaccac ccggcattct ctgcccactt tgcctt //