LOCUS GU557064 1781 bp mRNA linear HUM 15-JUN-2011
DEFINITION Homo sapiens basigin isoform 3 (BSG) mRNA, complete cds.
ACCESSION GU557064
VERSION GU557064.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Liao,C.G., Kong,L.M., Song,F., Xing,J.L., Wang,L.X., Sun,Z.J.,
Tang,H., Yao,H., Zhang,Y., Wang,L., Wang,Y., Yang,X.M., Li,Y. and
Chen,Z.N.
TITLE Characterization of basigin isoforms and the inhibitory function of
basigin-3 in human hepatocellular carcinoma proliferation and
invasion
JOURNAL Mol. Cell. Biol. 31 (13), 2591-2604 (2011)
PUBMED 21536654
REFERENCE 2 (bases 1 to 1781)
AUTHORS Liao,C.G., Kong,L.M., Li,Y., Yang,X.M. and Chen,Z.N.
TITLE Direct Submission
JOURNAL Submitted (21-JAN-2010) Cell Engineering Research Centre, Fourth
Military Medical University, No.17 West Changle Street, Xi'an,
Shannxi 710032, P.R. China
FEATURES Location/Qualifiers
source 1..1781
/db_xref="H-InvDB:HIT000648825"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="19"
/map="19p13.3"
/cell_line="SMMC-7721"
/cell_type="hepatocellular carcinoma cell"
gene 1..1781
/gene="BSG"
5'UTR 1..482
/gene="BSG"
CDS 483..1013
/gene="BSG"
/note="adhesion molecule; short isoform containing only
one immunoglobulin-like domain; OK blood group; CD147;
HAb18G/CD147; EMMPRIN"
/codon_start=1
/product="basigin isoform 3"
/protein_id="ADD31881.1"
/translation="MGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDW
AWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQ
AIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSG
QHQNDKGKNVRQRNSS"
3'UTR 1014..1781
/gene="BSG"
regulatory 1734..1739
/regulatory_class="polyA_signal_sequence"
/gene="BSG"
polyA_site 1763
/gene="BSG"
BASE COUNT 360 a 587 c 478 g 356 t
ORIGIN
1 agttagccct tcgcgttcgg cttagtctgc ggtcctcttg cattgcgact ccgagtttaa
61 cttccaacac acactttcaa cctccaagag acgcccccac ctgtgtcgcc ccaatagcga
121 cttttctcac cgtggtcgcc gcggaacttc aagggtcctt cctacccgcg ttgctgagag
181 tctgggttta cgcgtcacct cgggcgggac ccgatcctcc gctcctgagg cccccacaat
241 gaagcagtcg gacgcgtctc cccaagaaag ccggcacagt cttcactacc gtagaagacc
301 ttggctccaa gatactcctc acctgctcct tgaatgacag cgccacagag gtcacagggc
361 accgctggct gaaggggggc gtggtgctga aggaggacgc gctgcccggc cagaaaacgg
421 agttcaaggt ggactccgac gaccagtggg gagagtactc ctgcgtcttc ctccccgagc
481 ccatgggcac ggccaacatc cagctccacg ggcctcccag agtgaaggct gtgaagtcgt
541 cagaacacat caacgagggg gagacggcca tgctggtctg caagtcagag tccgtgccac
601 ctgtcactga ctgggcctgg tacaagatca ctgactctga ggacaaggcc ctcatgaacg
661 gctccgagag caggttcttc gtgagttcct cgcagggccg gtcagagcta cacattgaga
721 acctgaacat ggaggccgac cccggccagt accggtgcaa cggcaccagc tccaagggct
781 ccgaccaggc catcatcacg ctccgcgtgc gcagccacct ggccgccctc tggcccttcc
841 tgggcatcgt ggctgaggtg ctggtgctgg tcaccatcat cttcatctac gagaagcgcc
901 ggaagcccga ggacgtcctg gatgatgacg acgccggctc tgcacccctg aagagcagcg
961 ggcagcacca gaatgacaaa ggcaagaacg tccgccagag gaactcttcc tgaggcaggt
1021 ggcccgagga cgctccctgc tccacgtctg cgccgccgcc ggagtccact cccagtgctt
1081 gcaagattcc aagttctcac ctcttaaaga aaacccaccc cgtagattcc catcatacac
1141 ttccttcttt tttaaaaaag ttgggttttc tccattcagg attctgttcc ttaggttttt
1201 ttccttctga agtgtttcac gagagcccgg gagctgctgc cctgcggccc cgtctgtggc
1261 tttcagcctc tgggtctgag tcatggccgg gtgggcggca cagccttctc cactggccgg
1321 agtcagtgcc aggtccttgc cctttgtgga aagtcacagg tcacacgagg ggccccgtgt
1381 cctgcctgtc tgaagccaat gctgtctggt tgcgccattt ttgtgctttt atgtttaatt
1441 ttatgagggc cacgggtctg tgttcgactc agcctcaggg acgactctga cctcttggcc
1501 acagaggact cacttgccca caccgagggc gaccccgtca cagcctcaag tcactcccaa
1561 gccccctcct tgtctgtgca tccgggggca gctctggagg gggtttgctg gggaactggc
1621 gccatcgccg ggactccaga accgcagaag cctccccagc tcacccctgg aggacggccg
1681 gctctctata gcaccagggc tcacgtggga acccccctcc cacccaccgc cacaataaag
1741 atcgccccca cctccaccct caaaaaaaaa aaaaaaaaaa a
//