LOCUS GU479452 2435 bp mRNA linear HUM 13-MAR-2010
DEFINITION Homo sapiens tyrosine phosphatase LYP variant 3 mRNA, complete cds,
alternatively spliced.
ACCESSION GU479452
VERSION GU479452.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2435)
AUTHORS Wang,S., Dong,H., Han,J., Ho,W.T., Fu,X. and Zhao,Z.J.
TITLE Identification of a Variant Form of Tyrosine Phosphatase LYP
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2435)
AUTHORS Wang,S., Dong,H., Han,J., Ho,W.T., Fu,X. and Zhao,Z.J.
TITLE Direct Submission
JOURNAL Submitted (18-JAN-2010) Department of Pathology, University of
Oklahoma Health Sciences Center, 940 Stanton L. Young Blvd., BMSB
451, Oklahoma City, OK 73104, USA
FEATURES Location/Qualifiers
source 1..2435
/db_xref="H-InvDB:HIT000648616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1p13.3-p13.1"
/PCR_primers="fwd_seq: gacatgccctccctcaacctactta, rev_seq:
tgcaggtgtacttgcagcccatatta"
CDS 51..2390
/note="LYP3; alternatively spliced"
/codon_start=1
/product="tyrosine phosphatase LYP variant 3"
/protein_id="ADD59979.1"
/translation="MDQREILQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTY
PTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAYIAT
QGPLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSC
EAEKRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQED
DSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQ
EQYELVYNAVLELFKRQMDVIRDKHSGTESQAKHCIPEKNHTLQADSYSPNLPKSTTK
AAKMMNQQRTKMEIKESSSFDFRTSEISAKEELVLHPAKSSTSFDFLELNYSFDKNAD
TTMKWQTKAFPIVGEPLQKHQSLDLGSLLFEGCSNSKPVNAAGRYFNSKVPITRTKST
PFELIQQRETKEVDSKENFSYLESQPHDSCFVEMQAQKVMHVSSAELNYSLPYDSKHQ
IRNASNVKHHDSSALGVYSYIPLVENPYFSSWPPSGTSSKMSLDLPEKQDGTVFPSSL
LPTSSTSLFSYYNSHDSLSLNSPTNISSLLNQESAVLATAPRIDDEIPPPLPVWTPES
FIVVEEAGEFSPNVPKSLSSAVKSVKLRSPKSELHQDRSSPPPPLPERTLESFFLADE
DCMQAQSIETYSTSYPDTMENSTSSKQTLKTPGKSFTRSKSLKILRNMKKSICNSCPP
NKPAESVQSNNSSSFLNFGFANRFSKPKGPRNPPPTWNI"
BASE COUNT 780 a 514 c 456 g 685 t
ORIGIN
1 gacatgccct ccctcaacct acttatagac tatttttctt gctctgcagc atggaccaaa
61 gagaaattct gcagaagttc ctggatgagg cccaaagcaa gaaaattact aaagaggagt
121 ttgccaatga atttctgaag ctgaaaaggc aatctaccaa gtacaaggca gacaaaacct
181 atcctacaac tgtggctgag aagcccaaga atatcaagaa aaacagatat aaggatattt
241 tgccctatga ttatagccgg gtagaactat ccctgataac ctctgatgag gattccagct
301 acatcaatgc caacttcatt aagggagttt atggacccaa ggcttatatt gccacccagg
361 gtcctttatc tacaaccctc ctggacttct ggaggatgat ttgggaatat agtgtcctta
421 tcattgttat ggcatgcatg gagtatgaaa tgggaaagaa aaagtgtgag cgctactggg
481 ctgagccagg agagatgcag ctggaatttg gccctttctc tgtatcctgt gaagctgaaa
541 aaaggaaatc tgattatata atcaggactc taaaagttaa gttcaatagt gaaactcgaa
601 ctatctacca gtttcattac aagaattggc cagaccatga tgtaccttca tctatagacc
661 ctattcttga gctcatctgg gatgtacgtt gttaccaaga ggatgacagt gttcccatat
721 gcattcactg cagtgctggc tgtggaagga ctggtgttat ttgtgctatt gattatacat
781 ggatgttgct aaaagatggg ataattcctg agaacttcag tgttttcagt ttgatccggg
841 aaatgcggac acagaggcct tcattagttc aaacgcagga acaatatgaa ctggtctaca
901 atgctgtatt agaactattt aagagacaga tggatgttat cagagataaa cattctggaa
961 cagagagtca agcaaagcat tgtattcctg agaaaaatca cactctccaa gcagactctt
1021 attctcctaa tttaccaaaa agtaccacaa aagcagcaaa aatgatgaac caacaaagga
1081 caaaaatgga aatcaaagaa tcttcttcct ttgactttag gacttctgaa ataagtgcaa
1141 aagaagagct agttttgcac cctgctaaat caagcacttc ttttgacttt ctggagctaa
1201 attacagttt tgacaaaaat gctgacacaa ccatgaaatg gcagacaaag gcatttccaa
1261 tagttgggga gcctcttcag aagcatcaaa gtttggattt gggctctctt ttgtttgagg
1321 gatgttctaa ttctaaacct gtaaatgcag caggaagata ttttaattca aaggtgccaa
1381 taacacggac caaatcaact ccttttgaat tgatacagca gagagaaacc aaggaggtgg
1441 acagcaagga aaacttttct tatttggaat ctcaaccaca tgattcttgt tttgtagaga
1501 tgcaggctca aaaagtaatg catgtttctt cagcagaact gaattattca ctgccatatg
1561 actctaaaca ccaaatacgt aatgcctcta atgtaaagca ccatgactct agtgctcttg
1621 gtgtatattc ttacatacct ttagtggaaa atccttattt ttcatcatgg cctccaagtg
1681 gtaccagttc taagatgtct cttgatttac ctgagaagca agatggaact gtttttcctt
1741 cttctctgtt gccaacatcc tctacatccc tcttctctta ttacaattca catgattctt
1801 tatcactgaa ttctccaacc aatatttcct cactattgaa ccaggagtca gctgtactag
1861 caactgctcc aaggatagat gatgaaatcc cccctccact tcctgtatgg acacctgaat
1921 catttattgt ggttgaggaa gctggagaat tctcaccaaa tgttcccaaa tccttatcct
1981 cagctgtgaa gagtgtaaaa ctccgaagtc ctaaatcaga actacatcaa gatcgttctt
2041 ctcccccacc tcctctccca gaaagaactc tagagtcctt ctttcttgcc gatgaagatt
2101 gtatgcaggc ccaatctata gaaacatatt ctactagcta tcctgacacc atggaaaatt
2161 caacatcttc aaaacagaca ctgaagactc ctggaaaaag tttcacaagg agtaagagtt
2221 tgaaaatttt gcgaaacatg aaaaagagta tctgtaattc ttgcccacca aacaagcctg
2281 cagaatctgt tcagtcaaat aactccagct catttctgaa ttttggtttt gcaaaccgtt
2341 tttcaaaacc caaaggacca aggaatccac caccaacttg gaatatttaa taaaactcca
2401 gatttataat aatatgggct gcaagtacac ctgca
//