LOCUS GQ397482 4362 bp mRNA linear HUM 19-JAN-2010
DEFINITION Homo sapiens CD163-like1 (CD163L1) mRNA, complete cds.
ACCESSION GQ397482
VERSION GQ397482.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4362)
AUTHORS Van Gorp,H., Van Breedam,W., Van Doorsselaere,J., Delputte,P.L. and
Nauwynck,H.J.
TITLE Identification of the CD163 Protein Domains Involved in Infection
of the Porcine Reproductive and Respiratory Syndrome Virus
JOURNAL J. Virol. 84 (6), 3101-3105 (2010)
PUBMED 20032174
REFERENCE 2 (bases 1 to 4362)
AUTHORS Van Gorp,H., Van Doorsselaere,J., Delputte,P.L. and Nauwynck,H.J.
TITLE Direct Submission
JOURNAL Submitted (20-JUL-2009) Department of Virology, Parasitology, and
Immunology, Faculty of Veterinary Medicine, Ghent University,
Merelbeke 9820, Belgium
FEATURES Location/Qualifiers
source 1..4362
/db_xref="H-InvDB:HIT000648044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="12"
/map="12p13.3"
gene 1..4362
/gene="CD163L1"
/gene_synonym="CD163b"
/gene_synonym="M160"
CDS 1..4362
/gene="CD163L1"
/gene_synonym="CD163b"
/gene_synonym="M160"
/note="scavenger receptor"
/codon_start=1
/product="CD163-like1"
/protein_id="ADB45259.1"
/translation="MMLPQNSWHIDFGRCCCHQNLFSAVVTCILLLNSCFLISSFNGT
DLELRLVNGDGPCSGTVEVKFQGQWGTVCDDGWNTTASTVVCKQLGCPFSFAMFRFGQ
AVTRHGKIWLDDVSCYGNESALWECQHREWGSHNCYHGEDVGVNCYGEANLGLRLVDG
NNSCSGRVEVKFQERWGTICDDGWNLNTAAVVCRQLGCPSSFISSGVVNSPAVLRPIW
LDDILCQGNELALWNCRHRGWGNHDCSHNEDVTLTCYDSSDLELRLVGGTNRCMGRVE
LKIQGRWGTVCHHKWNNAAADVVCKQLGCGTALHFAGLPHLQSGSDVVWLDGVSCSGN
ESFLWDCRHSGTVNFDCLHQNDVSVICSDGADLELRLADGSNNCSGRVEVRIHEQWWT
ICDQNWKNEQALVVCKQLGCPFSVFGSRRAKPSNEARDIWINSISCTGNESALWDCTY
DGKAKRTCFRRSDAGVICSDKADLDLRLVGAHSPCYGRLEVKYQGEWGTVCHDRWSTR
NAAVVCKQLGCGKPMHVFGMTYFKEASGPIWLDDVSCIGNESNIWDCEHSGWGKHNCV
HREDVIVTCSGDATWGLRLVGGSNRCSGRLEVYFQGRWGTVCDDGWNSKAAAVVCSQL
DCPSSIIGMGLGNASTGYGKIWLDDVSCDGDESDLWSCRNSGWGNNDCSHSEDVGVIC
SDASDMELRLVGGSSRCAGKVEVNVQGAVGILCANGWGMNIAEVVCRQLECGSAIRVS
REPHFTERTLHILMSNSGCTGGEASLWDCIRWEWKQTACHLNMEASLICSAHRQPRLV
GADMPCSGRVEVKHADTWRSVCDSDFSLHAANVLCRELNCGDAISLSVGDHFGKGNGL
TWAEKFQCEGSETHLALCPIVQHPEDTCIHSREVGVVCSRYTDVRLVNGKSQCDGQVE
INVLGHWGSLCDTHWDPEDARVLCRQLSCGTALSTTGGKYIGERSVRVWGHRFHCLGN
ESLLDNCQMTVLGAPPCIHGNTVSVICTGSLTQPLFPCLANVSDPYLSAVPEGSALIC
LEDKRLRLVDGDSRCAGRVEIYHDGFWGTICDDGWDLSDAHVVCQKLGCGVAFNATVS
AHFGEGSGPIWLDDLNCTGMESHLWQCPSRGWGQHDCRHKEDAGVICSEFTALRLYSE
TETESCAGRLEVFYNGTWGSVGRRNITTAIAGIVCRQLGCGENGVVSLAPLSKTGSGF
MWVDDIQCPKTHISIWQCLSAPWERRISSPAEETWITCEDRIRVRGGDTECSGRVEIW
HAGSWGTVCDDSWDLAEAEVVCQQLGCGSALAALRDASFGQGTGTIWLDDMRCKGNES
FLWDCHAKPWGQSDCGHKEDAGVRCSGQSLKSLNASSGHLALILSSIFGLLLLVLFIL
FLTWCRVQKQKHLPLRVSTRRRGSLEENLFHEMETCLKREDPHGTRTSDDTPNHGCED
ASDTSLLGVLPASEATK"
BASE COUNT 1061 a 880 c 1304 g 1117 t
ORIGIN
1 atgatgctgc ctcaaaactc gtggcatatt gattttggaa gatgctgctg tcatcagaac
61 cttttctctg ctgtggtaac ttgcatcctg ctcctgaatt cctgctttct catcagcagt
121 tttaatggaa cagatttgga gttgaggctg gtcaatggag acggtccctg ctctgggaca
181 gtggaggtga aattccaggg acagtggggg actgtgtgtg atgatgggtg gaacactact
241 gcctcaactg tcgtgtgcaa acagcttgga tgtccatttt ctttcgccat gtttcgtttt
301 ggacaagccg tgactagaca tggaaaaatt tggcttgatg atgtttcctg ttatggaaat
361 gagtcagctc tctgggaatg tcaacaccgg gaatggggaa gccataactg ttatcatgga
421 gaagatgttg gtgtgaactg ttatggtgaa gccaatctgg gtttgaggct agtggatgga
481 aacaactcct gttcagggag agtggaggtg aaattccaag aaaggtgggg gactatatgt
541 gatgatgggt ggaacttgaa tactgctgcc gtggtgtgca ggcaactagg atgtccatct
601 tcttttattt cttctggagt tgttaatagc cctgctgtat tgcgccccat ttggctggat
661 gacattttat gccaggggaa tgagttggca ctctggaatt gcagacatcg tggatgggga
721 aatcatgact gcagtcacaa tgaggatgtc acattaactt gttatgatag tagtgatctt
781 gaactaaggc ttgtaggtgg aactaaccgc tgtatgggga gagtagagct gaaaatccaa
841 ggaaggtggg ggaccgtatg ccaccataag tggaacaatg ctgcagctga tgtcgtatgc
901 aagcagttgg gatgtggaac cgcacttcac ttcgctggct tgcctcattt gcagtcaggg
961 tctgatgttg tatggcttga tggtgtctcc tgctccggta atgaatcttt tctttgggac
1021 tgcagacatt ccggaaccgt caattttgac tgtcttcatc aaaacgatgt gtctgtgatc
1081 tgctcagatg gagcagattt ggaactgcga ctagcagatg gaagtaacaa ttgttcaggg
1141 agagtagagg tgagaattca tgaacagtgg tggacaatat gtgaccagaa ctggaagaat
1201 gaacaagccc ttgtggtttg taagcagcta ggatgtccgt tcagcgtctt tggcagtcgt
1261 cgtgctaaac ctagtaatga agctagagac atttggataa acagcatatc ttgcactggg
1321 aatgagtcag ctctctggga ctgcacatat gatggaaaag caaagcgaac atgcttccga
1381 agatcagatg ctggagtaat ttgttctgat aaggcagatc tggacctaag gcttgtcggg
1441 gctcatagcc cctgttatgg gagattggag gtgaaatacc aaggagagtg ggggactgtg
1501 tgtcatgaca gatggagcac aaggaatgca gctgttgtgt gtaaacaatt gggatgtgga
1561 aagcctatgc atgtgtttgg tatgacctat tttaaagaag catcaggacc tatttggctg
1621 gatgacgttt cttgcattgg aaatgagtca aatatctggg actgtgaaca cagtggatgg
1681 ggaaagcata attgtgtaca cagagaggat gtgattgtaa cctgctcagg tgatgcaaca
1741 tggggcctga ggctggtggg cggcagcaac cgctgctcgg gaagactgga ggtgtacttt
1801 caaggacggt ggggcacagt gtgtgatgac ggctggaaca gtaaagctgc agctgtggtg
1861 tgtagccagc tggactgccc atcttctatc attggcatgg gtctgggaaa cgcttctaca
1921 ggatatggaa aaatttggct cgatgatgtt tcctgtgatg gagatgagtc agatctctgg
1981 tcatgcagga acagtgggtg gggaaataat gactgcagtc acagtgaaga tgttggagtg
2041 atctgttctg atgcatcgga tatggagctg aggcttgtgg gtggaagcag caggtgtgct
2101 ggaaaagttg aggtgaatgt ccagggtgcc gtgggaattc tgtgtgctaa tggctgggga
2161 atgaacattg ctgaagttgt ttgcaggcaa cttgaatgtg ggtctgcaat cagggtctcc
2221 agagagcctc atttcacaga aagaacatta cacatcttaa tgtcgaattc tggctgcact
2281 ggaggggaag cctctctctg ggattgtata cgatgggagt ggaaacagac tgcgtgtcat
2341 ttaaatatgg aagcaagttt gatctgctca gcccacaggc agcccaggct ggttggagct
2401 gatatgccct gctctggacg tgttgaagtg aaacatgcag acacatggcg ctctgtctgt
2461 gattctgatt tctctcttca tgctgccaat gtgctgtgca gagaattaaa ttgtggagat
2521 gccatatctc tttctgtggg agatcacttt ggaaaaggga atggtctaac ttgggccgaa
2581 aagttccagt gtgaagggag tgaaactcac cttgcattat gccccattgt tcaacatccg
2641 gaagacactt gtatccacag cagagaagtt ggagttgtct gttcccgata tacagatgtc
2701 cgacttgtga atggcaaatc ccagtgtgac gggcaagtgg agatcaacgt gcttggacac
2761 tggggctcac tgtgtgacac ccactgggac ccagaagatg cccgtgttct atgcagacag
2821 ctcagctgtg ggactgctct ctcaaccaca ggaggaaaat atattggaga aagaagtgtt
2881 cgtgtgtggg gacacaggtt tcattgctta gggaatgagt cacttctgga taactgtcaa
2941 atgacagttc ttggagcacc tccctgtatc catggaaata ctgtctctgt gatctgcaca
3001 ggaagcctga cccagccact gtttccatgc ctcgcaaatg tatctgaccc atatttgtct
3061 gcagttccag agggcagtgc tttgatctgc ttagaggaca aacggctccg cctagtggat
3121 ggggacagcc gctgtgccgg gagagtagag atctatcacg acggcttctg gggcaccatc
3181 tgtgatgacg gctgggacct gagcgatgcc cacgtggtgt gtcaaaagct gggctgtgga
3241 gtggccttca atgccacggt ctctgctcac tttggggagg ggtcagggcc catctggctg
3301 gatgacctga actgcacagg aatggagtcc cacttgtggc agtgcccttc ccgcggctgg
3361 gggcagcacg actgcaggca caaggaggac gcaggggtca tctgctcaga attcacagcc
3421 ttgaggctct acagtgaaac tgaaacagag agctgtgctg ggagattgga agtcttctat
3481 aacgggacct ggggcagcgt cggcaggagg aacatcacca cagccatagc aggcattgtg
3541 tgcaggcagc tgggctgtgg ggagaatgga gttgtcagcc tcgccccttt atctaagaca
3601 ggctctggtt tcatgtgggt ggatgacatt cagtgtccta aaacgcatat ctccatatgg
3661 cagtgcctgt ctgccccatg ggagcgaaga atctccagcc cagcagaaga gacctggatc
3721 acatgtgaag atagaataag agtgcgtgga ggagacaccg agtgctctgg gagagtggag
3781 atctggcacg caggctcctg gggcacagtg tgtgatgact cctgggacct ggccgaggcg
3841 gaagtggtgt gtcagcagct gggctgtggc tctgctctgg ctgccctgag ggacgcttcg
3901 tttggccagg gaactggaac catctggttg gatgacatgc ggtgcaaagg aaatgagtca
3961 tttctatggg actgtcacgc caaaccctgg ggacagagtg actgtggaca caaggaagat
4021 gctggcgtga ggtgctctgg acagtcgctg aaatcactga atgcctcctc aggtcattta
4081 gcacttattt tatccagtat ctttgggctc cttctcctgg ttctgtttat tctatttctc
4141 acgtggtgcc gagttcagaa acaaaaacat ctgcccctca gagtttcaac cagaaggagg
4201 ggttctctcg aggagaattt attccatgag atggagacct gcctcaagag agaggaccca
4261 catgggacaa gaacctcaga tgacaccccc aaccatggtt gtgaagatgc tagcgacaca
4321 tcgctgttgg gagttcttcc tgcctctgaa gccacaaaat ga
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