LOCUS       FR748223                1480 bp    mRNA    linear   HUM 18-JUL-2011
DEFINITION  Homo sapiens mRNA for transcription factor 4 isoform I- (TCF4
            gene).
ACCESSION   FR748223
VERSION     FR748223.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1480)
  AUTHORS   Sepp M.
  JOURNAL   Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene
            Technolgy, Tallinn University of Technology, Akadeemia tee 15,
            12618 Tallinn, ESTONIA.
REFERENCE   2
  AUTHORS   Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T.
  TITLE     functional diversity of human basic helix-loop-helix transcription
            factor TCF4 isoforms generated by alternative 5' exon usage and
            splicing
  JOURNAL   PLoS One 6(7), e22138-e22138(2011).
   PUBMED   21789225
FEATURES             Location/Qualifiers
     source          1..1480
                     /db_xref="H-InvDB:HIT000714785"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             1..1356
                     /gene="TCF4"
                     /product="transcription factor 4, isoform I-"
                     /note="exons 10-20"
                     /db_xref="GOA:P15884"
                     /db_xref="HGNC:HGNC:11634"
                     /db_xref="InterPro:IPR011598"
                     /db_xref="InterPro:IPR036638"
                     /db_xref="PDB:2KWF"
                     /db_xref="PDB:6OD3"
                     /db_xref="PDB:6OD4"
                     /db_xref="PDB:6OD5"
                     /db_xref="UniProtKB/Swiss-Prot:P15884"
                     /protein_id="CBY80202.1"
                     /translation="MQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPH
                     ERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSS
                     QTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYE
                     GPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLG
                     SGYGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQD
                     PYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDD
                     EDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILH
                     QAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHMGQ
                     M"
     variation       1281
                     /replace="a"
                     /note="SNP rs8766"
BASE COUNT          393 a          411 c          356 g          320 t
ORIGIN      
        1 atgcaagatg gccatcacag cagtgaccct tggagctcct ccagtgggat gaatcagcct
       61 ggctatgcag gaatgttggg caactcttct catattccac agtccagcag ctactgtagc
      121 ctgcatccac atgaacgttt gagctatcca tcacactcct cagcagacat caattccagt
      181 cttcctccga tgtccacttt ccatcgtagt ggtacaaacc attacagcac ctcttcctgt
      241 acgcctcctg ccaacgggac agacagtata atggcaaata gaggaagcgg ggcagccggc
      301 agctcccaga ctggagatgc tctggggaaa gcacttgctt cgatctattc tccagatcac
      361 actaacaaca gcttttcatc aaacccttca actcctgttg gctctcctcc atctctctca
      421 gcaggcacag ctgtttggtc tagaaatgga ggacaggcct catcgtctcc taattatgaa
      481 ggacccttac actctttgca aagccgaatt gaagatcgtt tagaaagact ggatgatgct
      541 attcatgttc tccggaacca tgcagtgggc ccatccacag ctatgcctgg tggtcatggg
      601 gacatgcatg gaatcattgg accttctcat aatggagcca tgggtggtct gggctcaggg
      661 tatggaaccg gccttctttc agccaacaga cattcactca tggtggggac ccatcgtgaa
      721 gatggcgtgg ccctgagagg cagccattct cttctgccaa accaggttcc ggttccacag
      781 cttcctgtcc agtctgcgac ttcccctgac ctgaacccac cccaggaccc ttacagaggc
      841 atgccaccag gactacaggg gcagagtgtc tcctctggca gctctgagat caaatccgat
      901 gacgagggtg atgagaacct gcaagacacg aaatcttcgg aggacaagaa attagatgac
      961 gacaagaagg atatcaaatc aattactagc aataatgacg atgaggacct gacaccagag
     1021 cagaaggcag agcgtgagaa ggagcggagg atggccaaca atgcccgaga gcgtctgcgg
     1081 gtccgtgaca tcaacgaggc tttcaaagag ctcggccgca tggtgcagct ccacctcaag
     1141 agtgacaagc cccagaccaa gctcctgatc ctccaccagg cggtggccgt catcctcagt
     1201 ctggagcagc aagtccgaga aaggaatctg aatccgaaag ctgcgtgtct gaaaagaagg
     1261 gaggaagaga aggtgtcctc ggagcctccc cctctctcct tggccggccc acaccctgga
     1321 atgggagacg catcgaatca catgggacag atgtaaaagg gtccaagttg ccacattgct
     1381 tcattaaaac aagagaccac ttccttaaca gctgtattat cttaaaccca cataaacact
     1441 tctccttaac ccccattttt gtaatataag acaagtctga
//