LOCUS       FR748222                1648 bp    mRNA    linear   HUM 18-JUL-2011
DEFINITION  Homo sapiens mRNA for transcription factor 4 isoform H- (TCF4
            gene).
ACCESSION   FR748222
VERSION     FR748222.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Sepp M.
  JOURNAL   Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene
            Technolgy, Tallinn University of Technology, Akadeemia tee 15,
            12618 Tallinn, ESTONIA.
REFERENCE   2
  AUTHORS   Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T.
  TITLE     functional diversity of human basic helix-loop-helix transcription
            factor TCF4 isoforms generated by alternative 5' exon usage and
            splicing
  JOURNAL   PLoS One 6(7), e22138-e22138(2011).
   PUBMED   21789225
FEATURES             Location/Qualifiers
     source          1..1648
                     /db_xref="H-InvDB:HIT000714784"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             1..1524
                     /gene="TCF4"
                     /product="transcription factor 4, isoform H-"
                     /note="exons 10c, 10-20"
                     /db_xref="GOA:P15884"
                     /db_xref="HGNC:HGNC:11634"
                     /db_xref="InterPro:IPR011598"
                     /db_xref="InterPro:IPR036638"
                     /db_xref="PDB:2KWF"
                     /db_xref="PDB:6OD3"
                     /db_xref="PDB:6OD4"
                     /db_xref="PDB:6OD5"
                     /db_xref="UniProtKB/Swiss-Prot:P15884"
                     /protein_id="CBY80201.1"
                     /translation="MKFKQCRCSDTGLCCLDHEGKAEVYAPSASTADYNRDSPGYPSS
                     KPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHER
                     LSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQT
                     GDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGP
                     LHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSG
                     YGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPY
                     RGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITSNNDDED
                     LTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQA
                     VAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHMGQM"
     variation       1449
                     /replace="a"
                     /note="SNP rs8766"
BASE COUNT          441 a          461 c          390 g          356 t
ORIGIN      
        1 atgaaattta aacaatgcag atgctcagat acagggctat gttgcctgga ccacgaaggg
       61 aaagcagagg tctatgctcc atcagcaagc actgccgact acaataggga ctcgccaggc
      121 tatccttcct ccaaaccagc aaccagcact ttccctagct ccttcttcat gcaagatggc
      181 catcacagca gtgacccttg gagctcctcc agtgggatga atcagcctgg ctatgcagga
      241 atgttgggca actcttctca tattccacag tccagcagct actgtagcct gcatccacat
      301 gaacgtttga gctatccatc acactcctca gcagacatca attccagtct tcctccgatg
      361 tccactttcc atcgtagtgg tacaaaccat tacagcacct cttcctgtac gcctcctgcc
      421 aacgggacag acagtataat ggcaaataga ggaagcgggg cagccggcag ctcccagact
      481 ggagatgctc tggggaaagc acttgcttcg atctattctc cagatcacac taacaacagc
      541 ttttcatcaa acccttcaac tcctgttggc tctcctccat ctctctcagc aggcacagct
      601 gtttggtcta gaaatggagg acaggcctca tcgtctccta attatgaagg acccttacac
      661 tctttgcaaa gccgaattga agatcgttta gaaagactgg atgatgctat tcatgttctc
      721 cggaaccatg cagtgggccc atccacagct atgcctggtg gtcatgggga catgcatgga
      781 atcattggac cttctcataa tggagccatg ggtggtctgg gctcagggta tggaaccggc
      841 cttctttcag ccaacagaca ttcactcatg gtggggaccc atcgtgaaga tggcgtggcc
      901 ctgagaggca gccattctct tctgccaaac caggttccgg ttccacagct tcctgtccag
      961 tctgcgactt cccctgacct gaacccaccc caggaccctt acagaggcat gccaccagga
     1021 ctacaggggc agagtgtctc ctctggcagc tctgagatca aatccgatga cgagggtgat
     1081 gagaacctgc aagacacgaa atcttcggag gacaagaaat tagatgacga caagaaggat
     1141 atcaaatcaa ttactagcaa taatgacgat gaggacctga caccagagca gaaggcagag
     1201 cgtgagaagg agcggaggat ggccaacaat gcccgagagc gtctgcgggt ccgtgacatc
     1261 aacgaggctt tcaaagagct cggccgcatg gtgcagctcc acctcaagag tgacaagccc
     1321 cagaccaagc tcctgatcct ccaccaggcg gtggccgtca tcctcagtct ggagcagcaa
     1381 gtccgagaaa ggaatctgaa tccgaaagct gcgtgtctga aaagaaggga ggaagagaag
     1441 gtgtcctcgg agcctccccc tctctccttg gccggcccac accctggaat gggagacgca
     1501 tcgaatcaca tgggacagat gtaaaagggt ccaagttgcc acattgcttc attaaaacaa
     1561 gagaccactt ccttaacagc tgtattatct taaacccaca taaacacttc tccttaaccc
     1621 ccatttttgt aatataagac aagtctga
//