LOCUS       FR748220                1660 bp    mRNA    linear   HUM 18-JUL-2011
DEFINITION  Homo sapiens mRNA for transcription factor 4 isoform A+ (TCF4
            gene).
ACCESSION   FR748220
VERSION     FR748220.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Sepp M.
  JOURNAL   Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene
            Technolgy, Tallinn University of Technology, Akadeemia tee 15,
            12618 Tallinn, ESTONIA.
REFERENCE   2
  AUTHORS   Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T.
  TITLE     functional diversity of human basic helix-loop-helix transcription
            factor TCF4 isoforms generated by alternative 5' exon usage and
            splicing
  JOURNAL   PLoS One 6(7), e22138-e22138(2011).
   PUBMED   21789225
FEATURES             Location/Qualifiers
     source          1..1660
                     /db_xref="H-InvDB:HIT000714782"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             1..1536
                     /gene="TCF4"
                     /product="transcription factor 4, isoform A+"
                     /note="exons 10a, 10-20"
                     /db_xref="GOA:P15884"
                     /db_xref="HGNC:HGNC:11634"
                     /db_xref="InterPro:IPR011598"
                     /db_xref="InterPro:IPR036638"
                     /db_xref="PDB:2KWF"
                     /db_xref="PDB:6OD3"
                     /db_xref="PDB:6OD4"
                     /db_xref="PDB:6OD5"
                     /db_xref="UniProtKB/Swiss-Prot:P15884"
                     /protein_id="CBY80199.1"
                     /translation="MYCAYTIPGMGGNSLMYYYNGKAVYAPSASTADYNRDSPGYPSS
                     KPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHER
                     LSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQT
                     GDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGP
                     LHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSG
                     YGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPY
                     RGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITRSRSSNN
                     DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLI
                     LHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM
                     GQM"
     variation       1461
                     /replace="a"
                     /note="SNP rs8766"
BASE COUNT          439 a          467 c          392 g          362 t
ORIGIN      
        1 atgtactgcg catacacaat cccgggcatg ggcggcaact ctttgatgta ctactataat
       61 gggaaagcgg tctatgctcc atcagcaagc actgccgact acaataggga ctcgccaggc
      121 tatccttcct ccaaaccagc aaccagcact ttccctagct ccttcttcat gcaagatggc
      181 catcacagca gtgacccttg gagctcctcc agtgggatga atcagcctgg ctatgcagga
      241 atgttgggca actcttctca tattccacag tccagcagct actgtagcct gcatccacat
      301 gaacgtttga gctatccatc acactcctca gcagacatca attccagtct tcctccgatg
      361 tccactttcc atcgtagtgg tacaaaccat tacagcacct cttcctgtac gcctcctgcc
      421 aacgggacag acagtataat ggcaaataga ggaagcgggg cagccggcag ctcccagact
      481 ggagatgctc tggggaaagc acttgcttcg atctattctc cagatcacac taacaacagc
      541 ttttcatcaa acccttcaac tcctgttggc tctcctccat ctctctcagc aggcacagct
      601 gtttggtcta gaaatggagg acaggcctca tcgtctccta attatgaagg acccttacac
      661 tctttgcaaa gccgaattga agatcgttta gaaagactgg atgatgctat tcatgttctc
      721 cggaaccatg cagtgggccc atccacagct atgcctggtg gtcatgggga catgcatgga
      781 atcattggac cttctcataa tggagccatg ggtggtctgg gctcagggta tggaaccggc
      841 cttctttcag ccaacagaca ttcactcatg gtggggaccc atcgtgaaga tggcgtggcc
      901 ctgagaggca gccattctct tctgccaaac caggttccgg ttccacagct tcctgtccag
      961 tctgcgactt cccctgacct gaacccaccc caggaccctt acagaggcat gccaccagga
     1021 ctacaggggc agagtgtctc ctctggcagc tctgagatca aatccgatga cgagggtgat
     1081 gagaacctgc aagacacgaa atcttcggag gacaagaaat tagatgacga caagaaggat
     1141 atcaaatcaa ttactaggtc aagatctagc aataatgacg atgaggacct gacaccagag
     1201 cagaaggcag agcgtgagaa ggagcggagg atggccaaca atgcccgaga gcgtctgcgg
     1261 gtccgtgaca tcaacgaggc tttcaaagag ctcggccgca tggtgcagct ccacctcaag
     1321 agtgacaagc cccagaccaa gctcctgatc ctccaccagg cggtggccgt catcctcagt
     1381 ctggagcagc aagtccgaga aaggaatctg aatccgaaag ctgcgtgtct gaaaagaagg
     1441 gaggaagaga aggtgtcctc ggagcctccc cctctctcct tggccggccc acaccctgga
     1501 atgggagacg catcgaatca catgggacag atgtaaaagg gtccaagttg ccacattgct
     1561 tcattaaaac aagagaccac ttccttaaca gctgtattat cttaaaccca cataaacact
     1621 tctccttaac ccccattttt gtaatataag acaagtctga
//