LOCUS       FR748218                1738 bp    mRNA    linear   HUM 18-JUL-2011
DEFINITION  Homo sapiens mRNA for transcription factor 4 isoform D- (TCF4
            gene).
ACCESSION   FR748218
VERSION     FR748218.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Sepp M.
  JOURNAL   Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene
            Technolgy, Tallinn University of Technology, Akadeemia tee 15,
            12618 Tallinn, ESTONIA.
REFERENCE   2
  AUTHORS   Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T.
  TITLE     functional diversity of human basic helix-loop-helix transcription
            factor TCF4 isoforms generated by alternative 5' exon usage and
            splicing
  JOURNAL   PLoS One 6(7), e22138-e22138(2011).
   PUBMED   21789225
FEATURES             Location/Qualifiers
     source          1..1738
                     /db_xref="H-InvDB:HIT000714780"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             1..1614
                     /gene="TCF4"
                     /product="transcription factor 4, isoform D-"
                     /note="exons 8-20"
                     /db_xref="GOA:P15884"
                     /db_xref="HGNC:HGNC:11634"
                     /db_xref="InterPro:IPR011598"
                     /db_xref="InterPro:IPR036638"
                     /db_xref="PDB:2KWF"
                     /db_xref="PDB:6OD3"
                     /db_xref="PDB:6OD4"
                     /db_xref="PDB:6OD5"
                     /db_xref="UniProtKB/Swiss-Prot:P15884"
                     /protein_id="CBY80197.1"
                     /translation="MDMGNPGTLSPTKPGSQYYQYSSNNPRRRPLHSSAMEVQTKKVR
                     KVPPGLPSSVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSG
                     MNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNH
                     YSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTP
                     VGSPPSLSAGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVG
                     PSTAMPGGHGDMHGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVGTHREDGVALRGS
                     HSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDEN
                     LQDTKSSEDKKLDDDKKDIKSITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDI
                     NEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREE
                     EKVSSEPPPLSLAGPHPGMGDASNHMGQM"
     variation       1539
                     /replace="a"
                     /note="SNP rs8766"
BASE COUNT          462 a          493 c          404 g          379 t
ORIGIN      
        1 atggatatgg gcaacccagg aaccctttcg cccaccaaac ctggttccca gtactatcag
       61 tattctagca ataatccccg aaggaggcct cttcacagta gtgccatgga ggtacagaca
      121 aagaaagttc gaaaagttcc tccaggtttg ccatcttcag tctatgctcc atcagcaagc
      181 actgccgact acaataggga ctcgccaggc tatccttcct ccaaaccagc aaccagcact
      241 ttccctagct ccttcttcat gcaagatggc catcacagca gtgacccttg gagctcctcc
      301 agtgggatga atcagcctgg ctatgcagga atgttgggca actcttctca tattccacag
      361 tccagcagct actgtagcct gcatccacat gaacgtttga gctatccatc acactcctca
      421 gcagacatca attccagtct tcctccgatg tccactttcc atcgtagtgg tacaaaccat
      481 tacagcacct cttcctgtac gcctcctgcc aacgggacag acagtataat ggcaaataga
      541 ggaagcgggg cagccggcag ctcccagact ggagatgctc tggggaaagc acttgcttcg
      601 atctattctc cagatcacac taacaacagc ttttcatcaa acccttcaac tcctgttggc
      661 tctcctccat ctctctcagc aggcacagct gtttggtcta gaaatggagg acaggcctca
      721 tcgtctccta attatgaagg acccttacac tctttgcaaa gccgaattga agatcgttta
      781 gaaagactgg atgatgctat tcatgttctc cggaaccatg cagtgggccc atccacagct
      841 atgcctggtg gtcatgggga catgcatgga atcattggac cttctcataa tggagccatg
      901 ggtggtctgg gctcagggta tggaaccggc cttctttcag ccaacagaca ttcactcatg
      961 gtggggaccc atcgtgaaga tggcgtggcc ctgagaggca gccattctct tctgccaaac
     1021 caggttccgg ttccacagct tcctgtccag tctgcgactt cccctgacct gaacccaccc
     1081 caggaccctt acagaggcat gccaccagga ctacaggggc agagtgtctc ctctggcagc
     1141 tctgagatca aatccgatga cgagggtgat gagaacctgc aagacacgaa atcttcggag
     1201 gacaagaaat tagatgacga caagaaggat atcaaatcaa ttactagcaa taatgacgat
     1261 gaggacctga caccagagca gaaggcagag cgtgagaagg agcggaggat ggccaacaat
     1321 gcccgagagc gtctgcgggt ccgtgacatc aacgaggctt tcaaagagct cggccgcatg
     1381 gtgcagctcc acctcaagag tgacaagccc cagaccaagc tcctgatcct ccaccaggcg
     1441 gtggccgtca tcctcagtct ggagcagcaa gtccgagaaa ggaatctgaa tccgaaagct
     1501 gcgtgtctga aaagaaggga ggaagagaag gtgtcctcgg agcctccccc tctctccttg
     1561 gccggcccac accctggaat gggagacgca tcgaatcaca tgggacagat gtaaaagggt
     1621 ccaagttgcc acattgcttc attaaaacaa gagaccactt ccttaacagc tgtattatct
     1681 taaacccaca taaacacttc tccttaaccc ccatttttgt aatataagac aagtctga
//