LOCUS       FR748215                1876 bp    mRNA    linear   HUM 18-JUL-2011
DEFINITION  Homo sapiens mRNA for transcription factor 4 isoform C- delta (TCF4
            gene).
ACCESSION   FR748215
VERSION     FR748215.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Sepp M.
  JOURNAL   Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene
            Technolgy, Tallinn University of Technology, Akadeemia tee 15,
            12618 Tallinn, ESTONIA.
REFERENCE   2
  AUTHORS   Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T.
  TITLE     functional diversity of human basic helix-loop-helix transcription
            factor TCF4 isoforms generated by alternative 5' exon usage and
            splicing
  JOURNAL   PLoS One 6(7), e22138-e22138(2011).
   PUBMED   21789225
FEATURES             Location/Qualifiers
     source          1..1876
                     /db_xref="H-InvDB:HIT000714777"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             1..1752
                     /gene="TCF4"
                     /product="transcription factor 4, isoform C-delta"
                     /note="exons 4-7, 10-20"
                     /db_xref="GOA:P15884"
                     /db_xref="HGNC:HGNC:11634"
                     /db_xref="InterPro:IPR011598"
                     /db_xref="InterPro:IPR036638"
                     /db_xref="PDB:2KWF"
                     /db_xref="PDB:6OD3"
                     /db_xref="PDB:6OD4"
                     /db_xref="PDB:6OD5"
                     /db_xref="UniProtKB/Swiss-Prot:P15884"
                     /protein_id="CBY80194.1"
                     /translation="MFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPS
                     RNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQVYA
                     PSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGN
                     SSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANG
                     TDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTA
                     VWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDM
                     HGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQ
                     LPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKL
                     DDDKKDIKSITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQ
                     LHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSL
                     AGPHPGMGDASNHMGQM"
     variation       1677
                     /replace="a"
                     /note="SNP rs8766"
BASE COUNT          505 a          517 c          444 g          410 t
ORIGIN      
        1 atgttttcac ctcctgtgag cagtgggaaa aatggaccaa cttctttggc aagtggacat
       61 tttactggct caaatgtaga agacagaagt agctcagggt cctgggggaa tggaggacat
      121 ccaagcccgt ccaggaacta tggagatggg actccctatg accacatgac cagcagggac
      181 cttgggtcac atgacaatct ctctccacct tttgtcaatt ccagaataca aagtaaaaca
      241 gaaaggggct catactcatc ttatgggaga gaatcaaact tacagggttg ccaccaggtc
      301 tatgctccat cagcaagcac tgccgactac aatagggact cgccaggcta tccttcctcc
      361 aaaccagcaa ccagcacttt ccctagctcc ttcttcatgc aagatggcca tcacagcagt
      421 gacccttgga gctcctccag tgggatgaat cagcctggct atgcaggaat gttgggcaac
      481 tcttctcata ttccacagtc cagcagctac tgtagcctgc atccacatga acgtttgagc
      541 tatccatcac actcctcagc agacatcaat tccagtcttc ctccgatgtc cactttccat
      601 cgtagtggta caaaccatta cagcacctct tcctgtacgc ctcctgccaa cgggacagac
      661 agtataatgg caaatagagg aagcggggca gccggcagct cccagactgg agatgctctg
      721 gggaaagcac ttgcttcgat ctattctcca gatcacacta acaacagctt ttcatcaaac
      781 ccttcaactc ctgttggctc tcctccatct ctctcagcag gcacagctgt ttggtctaga
      841 aatggaggac aggcctcatc gtctcctaat tatgaaggac ccttacactc tttgcaaagc
      901 cgaattgaag atcgtttaga aagactggat gatgctattc atgttctccg gaaccatgca
      961 gtgggcccat ccacagctat gcctggtggt catggggaca tgcatggaat cattggacct
     1021 tctcataatg gagccatggg tggtctgggc tcagggtatg gaaccggcct tctttcagcc
     1081 aacagacatt cactcatggt ggggacccat cgtgaagatg gcgtggccct gagaggcagc
     1141 cattctcttc tgccaaacca ggttccggtt ccacagcttc ctgtccagtc tgcgacttcc
     1201 cctgacctga acccacccca ggacccttac agaggcatgc caccaggact acaggggcag
     1261 agtgtctcct ctggcagctc tgagatcaaa tccgatgacg agggtgatga gaacctgcaa
     1321 gacacgaaat cttcggagga caagaaatta gatgacgaca agaaggatat caaatcaatt
     1381 actagcaata atgacgatga ggacctgaca ccagagcaga aggcagagcg tgagaaggag
     1441 cggaggatgg ccaacaatgc ccgagagcgt ctgcgggtcc gtgacatcaa cgaggctttc
     1501 aaagagctcg gccgcatggt gcagctccac ctcaagagtg acaagcccca gaccaagctc
     1561 ctgatcctcc accaggcggt ggccgtcatc ctcagtctgg agcagcaagt ccgagaaagg
     1621 aatctgaatc cgaaagctgc gtgtctgaaa agaagggagg aagagaaggt gtcctcggag
     1681 cctccccctc tctccttggc cggcccacac cctggaatgg gagacgcatc gaatcacatg
     1741 ggacagatgt aaaagggtcc aagttgccac attgcttcat taaaacaaga gaccacttcc
     1801 ttaacagctg tattatctta aacccacata aacacttctc cttaaccccc atttttgtaa
     1861 tataagacaa gtctga
//