LOCUS FR748215 1876 bp mRNA linear HUM 18-JUL-2011 DEFINITION Homo sapiens mRNA for transcription factor 4 isoform C- delta (TCF4 gene). ACCESSION FR748215 VERSION FR748215.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1876) AUTHORS Sepp M. JOURNAL Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene Technolgy, Tallinn University of Technology, Akadeemia tee 15, 12618 Tallinn, ESTONIA. REFERENCE 2 AUTHORS Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T. TITLE functional diversity of human basic helix-loop-helix transcription factor TCF4 isoforms generated by alternative 5' exon usage and splicing JOURNAL PLoS One 6(7), e22138-e22138(2011). PUBMED 21789225 FEATURES Location/Qualifiers source 1..1876 /db_xref="H-InvDB:HIT000714777" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" CDS 1..1752 /gene="TCF4" /product="transcription factor 4, isoform C-delta" /note="exons 4-7, 10-20" /db_xref="GOA:P15884" /db_xref="HGNC:HGNC:11634" /db_xref="InterPro:IPR011598" /db_xref="InterPro:IPR036638" /db_xref="PDB:2KWF" /db_xref="PDB:6OD3" /db_xref="PDB:6OD4" /db_xref="PDB:6OD5" /db_xref="UniProtKB/Swiss-Prot:P15884" /protein_id="CBY80194.1" /translation="MFSPPVSSGKNGPTSLASGHFTGSNVEDRSSSGSWGNGGHPSPS RNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQSKTERGSYSSYGRESNLQGCHQVYA PSASTADYNRDSPGYPSSKPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGN SSHIPQSSSYCSLHPHERLSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANG TDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTA VWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDM HGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQ LPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKL DDDKKDIKSITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQ LHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSL AGPHPGMGDASNHMGQM" variation 1677 /replace="a" /note="SNP rs8766" BASE COUNT 505 a 517 c 444 g 410 t ORIGIN 1 atgttttcac ctcctgtgag cagtgggaaa aatggaccaa cttctttggc aagtggacat 61 tttactggct caaatgtaga agacagaagt agctcagggt cctgggggaa tggaggacat 121 ccaagcccgt ccaggaacta tggagatggg actccctatg accacatgac cagcagggac 181 cttgggtcac atgacaatct ctctccacct tttgtcaatt ccagaataca aagtaaaaca 241 gaaaggggct catactcatc ttatgggaga gaatcaaact tacagggttg ccaccaggtc 301 tatgctccat cagcaagcac tgccgactac aatagggact cgccaggcta tccttcctcc 361 aaaccagcaa ccagcacttt ccctagctcc ttcttcatgc aagatggcca tcacagcagt 421 gacccttgga gctcctccag tgggatgaat cagcctggct atgcaggaat gttgggcaac 481 tcttctcata ttccacagtc cagcagctac tgtagcctgc atccacatga acgtttgagc 541 tatccatcac actcctcagc agacatcaat tccagtcttc ctccgatgtc cactttccat 601 cgtagtggta caaaccatta cagcacctct tcctgtacgc ctcctgccaa cgggacagac 661 agtataatgg caaatagagg aagcggggca gccggcagct cccagactgg agatgctctg 721 gggaaagcac ttgcttcgat ctattctcca gatcacacta acaacagctt ttcatcaaac 781 ccttcaactc ctgttggctc tcctccatct ctctcagcag gcacagctgt ttggtctaga 841 aatggaggac aggcctcatc gtctcctaat tatgaaggac ccttacactc tttgcaaagc 901 cgaattgaag atcgtttaga aagactggat gatgctattc atgttctccg gaaccatgca 961 gtgggcccat ccacagctat gcctggtggt catggggaca tgcatggaat cattggacct 1021 tctcataatg gagccatggg tggtctgggc tcagggtatg gaaccggcct tctttcagcc 1081 aacagacatt cactcatggt ggggacccat cgtgaagatg gcgtggccct gagaggcagc 1141 cattctcttc tgccaaacca ggttccggtt ccacagcttc ctgtccagtc tgcgacttcc 1201 cctgacctga acccacccca ggacccttac agaggcatgc caccaggact acaggggcag 1261 agtgtctcct ctggcagctc tgagatcaaa tccgatgacg agggtgatga gaacctgcaa 1321 gacacgaaat cttcggagga caagaaatta gatgacgaca agaaggatat caaatcaatt 1381 actagcaata atgacgatga ggacctgaca ccagagcaga aggcagagcg tgagaaggag 1441 cggaggatgg ccaacaatgc ccgagagcgt ctgcgggtcc gtgacatcaa cgaggctttc 1501 aaagagctcg gccgcatggt gcagctccac ctcaagagtg acaagcccca gaccaagctc 1561 ctgatcctcc accaggcggt ggccgtcatc ctcagtctgg agcagcaagt ccgagaaagg 1621 aatctgaatc cgaaagctgc gtgtctgaaa agaagggagg aagagaaggt gtcctcggag 1681 cctccccctc tctccttggc cggcccacac cctggaatgg gagacgcatc gaatcacatg 1741 ggacagatgt aaaagggtcc aagttgccac attgcttcat taaaacaaga gaccacttcc 1801 ttaacagctg tattatctta aacccacata aacacttctc cttaaccccc atttttgtaa 1861 tataagacaa gtctga //