LOCUS       FR748212                1960 bp    mRNA    linear   HUM 18-JUL-2011
DEFINITION  Homo sapiens mRNA for transcription factor 4 isoform B+ delta (TCF4
            gene).
ACCESSION   FR748212
VERSION     FR748212.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Sepp M.
  JOURNAL   Submitted (02-DEC-2010) to the INSDC. Sepp M., Department of Gene
            Technolgy, Tallinn University of Technology, Akadeemia tee 15,
            12618 Tallinn, ESTONIA.
REFERENCE   2
  AUTHORS   Sepp M., Kannike K., Eesmaa A., Urb M., Timmusk T.
  TITLE     functional diversity of human basic helix-loop-helix transcription
            factor TCF4 isoforms generated by alternative 5' exon usage and
            splicing
  JOURNAL   PLoS One 6(7), e22138-e22138(2011).
   PUBMED   21789225
FEATURES             Location/Qualifiers
     source          1..1960
                     /db_xref="H-InvDB:HIT000714774"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     CDS             1..1836
                     /gene="TCF4"
                     /product="transcription factor 4, isoform B+ delta"
                     /note="exons 3-7, 10-20"
                     /db_xref="GOA:P15884"
                     /db_xref="HGNC:HGNC:11634"
                     /db_xref="InterPro:IPR011598"
                     /db_xref="InterPro:IPR036638"
                     /db_xref="PDB:2KWF"
                     /db_xref="PDB:6OD3"
                     /db_xref="PDB:6OD4"
                     /db_xref="PDB:6OD5"
                     /db_xref="UniProtKB/Swiss-Prot:P15884"
                     /protein_id="CBY80191.1"
                     /translation="MHHQQRMAALGTDKELSDLLDFSAMFSPPVSSGKNGPTSLASGH
                     FTGSNVEDRSSSGSWGNGGHPSPSRNYGDGTPYDHMTSRDLGSHDNLSPPFVNSRIQS
                     KTERGSYSSYGRESNLQGCHQVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDG
                     HHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHERLSYPSHSSADINSSLP
                     PMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDH
                     TNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLD
                     DAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSGYGTGLLSANRHSLMVG
                     THREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPYRGMPPGLQGQSVSSGS
                     SEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDLTPEQKAEREKE
                     RRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVR
                     ERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHMGQM"
     variation       1761
                     /replace="a"
                     /note="SNP rs8766"
BASE COUNT          529 a          534 c          468 g          429 t
ORIGIN      
        1 atgcatcacc aacagcgaat ggctgcctta gggacggaca aagagctgag tgatttactg
       61 gatttcagtg cgatgttttc acctcctgtg agcagtggga aaaatggacc aacttctttg
      121 gcaagtggac attttactgg ctcaaatgta gaagacagaa gtagctcagg gtcctggggg
      181 aatggaggac atccaagccc gtccaggaac tatggagatg ggactcccta tgaccacatg
      241 accagcaggg accttgggtc acatgacaat ctctctccac cttttgtcaa ttccagaata
      301 caaagtaaaa cagaaagggg ctcatactca tcttatggga gagaatcaaa cttacagggt
      361 tgccaccagg tctatgctcc atcagcaagc actgccgact acaataggga ctcgccaggc
      421 tatccttcct ccaaaccagc aaccagcact ttccctagct ccttcttcat gcaagatggc
      481 catcacagca gtgacccttg gagctcctcc agtgggatga atcagcctgg ctatgcagga
      541 atgttgggca actcttctca tattccacag tccagcagct actgtagcct gcatccacat
      601 gaacgtttga gctatccatc acactcctca gcagacatca attccagtct tcctccgatg
      661 tccactttcc atcgtagtgg tacaaaccat tacagcacct cttcctgtac gcctcctgcc
      721 aacgggacag acagtataat ggcaaataga ggaagcgggg cagccggcag ctcccagact
      781 ggagatgctc tggggaaagc acttgcttcg atctattctc cagatcacac taacaacagc
      841 ttttcatcaa acccttcaac tcctgttggc tctcctccat ctctctcagc aggcacagct
      901 gtttggtcta gaaatggagg acaggcctca tcgtctccta attatgaagg acccttacac
      961 tctttgcaaa gccgaattga agatcgttta gaaagactgg atgatgctat tcatgttctc
     1021 cggaaccatg cagtgggccc atccacagct atgcctggtg gtcatgggga catgcatgga
     1081 atcattggac cttctcataa tggagccatg ggtggtctgg gctcagggta tggaaccggc
     1141 cttctttcag ccaacagaca ttcactcatg gtggggaccc atcgtgaaga tggcgtggcc
     1201 ctgagaggca gccattctct tctgccaaac caggttccgg ttccacagct tcctgtccag
     1261 tctgcgactt cccctgacct gaacccaccc caggaccctt acagaggcat gccaccagga
     1321 ctacaggggc agagtgtctc ctctggcagc tctgagatca aatccgatga cgagggtgat
     1381 gagaacctgc aagacacgaa atcttcggag gacaagaaat tagatgacga caagaaggat
     1441 atcaaatcaa ttactaggtc aagatctagc aataatgacg atgaggacct gacaccagag
     1501 cagaaggcag agcgtgagaa ggagcggagg atggccaaca atgcccgaga gcgtctgcgg
     1561 gtccgtgaca tcaacgaggc tttcaaagag ctcggccgca tggtgcagct ccacctcaag
     1621 agtgacaagc cccagaccaa gctcctgatc ctccaccagg cggtggccgt catcctcagt
     1681 ctggagcagc aagtccgaga aaggaatctg aatccgaaag ctgcgtgtct gaaaagaagg
     1741 gaggaagaga aggtgtcctc ggagcctccc cctctctcct tggccggccc acaccctgga
     1801 atgggagacg catcgaatca catgggacag atgtaaaagg gtccaagttg ccacattgct
     1861 tcattaaaac aagagaccac ttccttaaca gctgtattat cttaaaccca cataaacact
     1921 tctccttaac ccccattttt gtaatataag acaagtctga
//