LOCUS FN394065 1269 bp mRNA linear HUM 25-JUN-2009 DEFINITION Homo sapiens mRNA for truncated collagen type VI alpha 4 precursor (COL6A4 gene), cell line HEK293. ACCESSION FN394065 VERSION FN394065.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1269) AUTHORS Kobbe B. JOURNAL Submitted (14-MAY-2009) to the INSDC. Kobbe B., Center for Biochemistry, University of Cologne, Joseph-Stelzmann-Str. 52, Cologne, 50931, GERMANY. REFERENCE 2 AUTHORS Wagener R., Gara S.K., Kobbe B., Paulsson M., Zaucke F. TITLE The knee osteoarthritis susceptibility locus DVWA on chromosome 3p24.3 is the 5' part of the split COL6A4 gene JOURNAL Matrix Biol. 0, 0(2009). FEATURES Location/Qualifiers source 1..1269 /db_xref="H-InvDB:HIT000559145" /organism="Homo sapiens" /mol_type="mRNA" /cell_line="HEK293" /db_xref="taxon:9606" 5'UTR <1..10 /gene="COL6A4" CDS 11..1168 /gene="COL6A4" /product="truncated collagen type VI alpha 4 precursor" /db_xref="H-InvDB:HIT000559145.4" /protein_id="CAY86115.1" /translation="METWKIFWGIILLEAGFGFKSQRIVCREASLGDVVFLVDTNINP QHARSVRNFLYILVNSFNVSSETIRVGLAKYSDVPHSEFLLSTYHRKGDVLRHIRQFQ FKPGGKKMGLALKFILDHHFQEASGSRASQEVPQIAVVISSGPVEDHVHGPAKALRKA GILLYAIGVRDAVWAELREIASSPQENFTSFVPNFSGLSNLAQKLRQELCDTLAKAAP HVDHVSPACREAALADIVFLVDSSTSIGPQNFQKVKNFLYSVILGLDISSDRVRVGLA QYNDNIYPAFQLNQHPLKSMILEQIQNLPYRTGGTNTGSALEFIRTNYLTEESGSRAK DRVPQIVILVTDGESNDEVQEVADRLKEDGVVVLCGRGQCPGCPRVAKNNQ" sig_peptide 11..64 /gene="COL6A4" mat_peptide 65..1165 /gene="COL6A4" /product="truncated collagen type VI alpha 4" 3'UTR 1169..>1269 /gene="COL6A4" BASE COUNT 322 a 301 c 341 g 305 t ORIGIN 1 cacatctaga atggagactt ggaagatatt ttgggggatc atcctccttg aagctggttt 61 tggcttcaag tcacagagga ttgtctgcag ggaagcctct ctgggagatg ttgtgtttct 121 ggtggacacc aacatcaacc cccaacatgc acgcagtgtg cggaacttct tgtacattct 181 ggtaaacagc ttcaacgtca gcagtgagac catccgtgtg ggtctggcca agtatagcga 241 tgtgccccat tcagagttct tgctttccac ctaccaccgc aaaggtgatg tgttgagaca 301 cattcggcag tttcaattta agcctggggg caagaagatg ggcctggccc tgaagttcat 361 tctagaccac cacttccagg aagcatcagg gagccgggca agccaagagg tacctcagat 421 cgccgtggtg atcagcagtg ggccagttga ggaccatgtc catggacctg cgaaggcatt 481 gaggaaggca ggcatcctgc tttatgctat tggcgtcaga gatgcagttt gggcagagct 541 cagggaaatt gccagtagtc ctcaggagaa ttttacctcc tttgttccta acttctctgg 601 tctgagcaat ctcgcccaga agctgcggca ggaactctgt gatacgttgg caaaggcagc 661 tccacatgtt gaccacgtct ctccagcttg cagagaagca gccctggcag acattgtgtt 721 tctagtagac agttcaacta gcatcggacc ccaaaacttc cagaaagtca agaacttcct 781 ttactccgtc atcttggggc ttgacatcag cagtgaccgt gtccgagtgg gacttgccca 841 gtataatgac aacatctacc cagccttcca gctgaaccag caccctctga agagcatgat 901 cttggagcag atccagaatc tgccataccg cacaggaggc acaaacacag ggagcgccct 961 ggagtttatc aggaccaact atttgactga ggagtctggc agtcgggcca aggacagagt 1021 tcctcagata gttatcctgg tgactgacgg ggagtcaaat gatgaggtcc aggaggtggc 1081 tgaccggttg aaagaagatg gagttgttgt gttatgtggt aggggtcaat gtccaggatg 1141 tccaagagtt gcaaaaaata accagtgagc catttgagaa gtttctcttc aacactgaaa 1201 acttcaatat cctgcaggat ttttcaggaa gtattcttca gactctgtgc tcagcagtgg 1261 agggtaaga //