LOCUS       FN394065                1269 bp    mRNA    linear   HUM 25-JUN-2009
DEFINITION  Homo sapiens mRNA for truncated collagen type VI alpha 4 precursor
            (COL6A4 gene), cell line HEK293.
ACCESSION   FN394065
VERSION     FN394065.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Kobbe B.
  JOURNAL   Submitted (14-MAY-2009) to the INSDC. Kobbe B., Center for
            Biochemistry, University of Cologne, Joseph-Stelzmann-Str. 52,
            Cologne, 50931, GERMANY.
REFERENCE   2
  AUTHORS   Wagener R., Gara S.K., Kobbe B., Paulsson M., Zaucke F.
  TITLE     The knee osteoarthritis susceptibility locus DVWA on chromosome
            3p24.3 is the 5' part of the split COL6A4 gene
  JOURNAL   Matrix Biol. 0, 0(2009).
FEATURES             Location/Qualifiers
     source          1..1269
                     /db_xref="H-InvDB:HIT000559145"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /cell_line="HEK293"
                     /db_xref="taxon:9606"
     5'UTR           <1..10
                     /gene="COL6A4"
     CDS             11..1168
                     /gene="COL6A4"
                     /product="truncated collagen type VI alpha 4 precursor"
                     /db_xref="H-InvDB:HIT000559145.4"
                     /protein_id="CAY86115.1"
                     /translation="METWKIFWGIILLEAGFGFKSQRIVCREASLGDVVFLVDTNINP
                     QHARSVRNFLYILVNSFNVSSETIRVGLAKYSDVPHSEFLLSTYHRKGDVLRHIRQFQ
                     FKPGGKKMGLALKFILDHHFQEASGSRASQEVPQIAVVISSGPVEDHVHGPAKALRKA
                     GILLYAIGVRDAVWAELREIASSPQENFTSFVPNFSGLSNLAQKLRQELCDTLAKAAP
                     HVDHVSPACREAALADIVFLVDSSTSIGPQNFQKVKNFLYSVILGLDISSDRVRVGLA
                     QYNDNIYPAFQLNQHPLKSMILEQIQNLPYRTGGTNTGSALEFIRTNYLTEESGSRAK
                     DRVPQIVILVTDGESNDEVQEVADRLKEDGVVVLCGRGQCPGCPRVAKNNQ"
     sig_peptide     11..64
                     /gene="COL6A4"
     mat_peptide     65..1165
                     /gene="COL6A4"
                     /product="truncated collagen type VI alpha 4"
     3'UTR           1169..>1269
                     /gene="COL6A4"
BASE COUNT          322 a          301 c          341 g          305 t
ORIGIN      
        1 cacatctaga atggagactt ggaagatatt ttgggggatc atcctccttg aagctggttt
       61 tggcttcaag tcacagagga ttgtctgcag ggaagcctct ctgggagatg ttgtgtttct
      121 ggtggacacc aacatcaacc cccaacatgc acgcagtgtg cggaacttct tgtacattct
      181 ggtaaacagc ttcaacgtca gcagtgagac catccgtgtg ggtctggcca agtatagcga
      241 tgtgccccat tcagagttct tgctttccac ctaccaccgc aaaggtgatg tgttgagaca
      301 cattcggcag tttcaattta agcctggggg caagaagatg ggcctggccc tgaagttcat
      361 tctagaccac cacttccagg aagcatcagg gagccgggca agccaagagg tacctcagat
      421 cgccgtggtg atcagcagtg ggccagttga ggaccatgtc catggacctg cgaaggcatt
      481 gaggaaggca ggcatcctgc tttatgctat tggcgtcaga gatgcagttt gggcagagct
      541 cagggaaatt gccagtagtc ctcaggagaa ttttacctcc tttgttccta acttctctgg
      601 tctgagcaat ctcgcccaga agctgcggca ggaactctgt gatacgttgg caaaggcagc
      661 tccacatgtt gaccacgtct ctccagcttg cagagaagca gccctggcag acattgtgtt
      721 tctagtagac agttcaacta gcatcggacc ccaaaacttc cagaaagtca agaacttcct
      781 ttactccgtc atcttggggc ttgacatcag cagtgaccgt gtccgagtgg gacttgccca
      841 gtataatgac aacatctacc cagccttcca gctgaaccag caccctctga agagcatgat
      901 cttggagcag atccagaatc tgccataccg cacaggaggc acaaacacag ggagcgccct
      961 ggagtttatc aggaccaact atttgactga ggagtctggc agtcgggcca aggacagagt
     1021 tcctcagata gttatcctgg tgactgacgg ggagtcaaat gatgaggtcc aggaggtggc
     1081 tgaccggttg aaagaagatg gagttgttgt gttatgtggt aggggtcaat gtccaggatg
     1141 tccaagagtt gcaaaaaata accagtgagc catttgagaa gtttctcttc aacactgaaa
     1201 acttcaatat cctgcaggat ttttcaggaa gtattcttca gactctgtgc tcagcagtgg
     1261 agggtaaga
//