LOCUS       FJ608822                 540 bp    mRNA    linear   HUM 24-JUL-2016
DEFINITION  Homo sapiens HNF4alpha10/11/12 (HNF4alpha) mRNA, partial cds,
            alternatively spliced.
ACCESSION   FJ608822
VERSION     FJ608822.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Huang,J., Levitsky,L.L. and Rhoads,D.B.
  TITLE     Novel P2 promoter-derived HNF4alpha isoforms with different
            N-terminus generated by alternate exon insertion
  JOURNAL   Exp. Cell Res. 315 (7), 1200-1211 (2009)
   PUBMED   19353766
REFERENCE   2  (bases 1 to 540)
  AUTHORS   Huang,J., Levitsky,L.L. and Rhoads,D.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2009) Pediatric Endocrinology, Mass General
            Hospital, 55 Fruit St. BHX410, Boston, MA 02114, USA
FEATURES             Location/Qualifiers
     source          1..540
                     /db_xref="H-InvDB:HIT000558737"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /PCR_primers="fwd_name: F5, fwd_seq: atggtcagcgtgaacgcgc,
                     rev_name: R3, rev_seq: gtccgacatcctcctcctg"
                     /PCR_primers="fwd_name: F6, fwd_seq: ctcgcagggtctggggtgc,
                     rev_name: R1, rev_seq: ttccttcttcatgccagccc"
     gene            1..>540
                     /gene="HNF4alpha"
     CDS             232..>540
                     /gene="HNF4alpha"
                     /note="transcription factor; alternatively spliced; TCF14;
                     nuclear hormone receptor; P2-derived isoform containing
                     alternative exon 1E results in different N-terminus"
                     /codon_start=1
                     /product="HNF4alpha10/11/12"
                     /protein_id="ACM50922.1"
                     /translation="MSDWGQGFPQDPPDTSPSEGTNLNAPNSLGVSALCAICGDRATG
                     KHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKK
                     E"
BASE COUNT          119 a          158 c          172 g           91 t
ORIGIN      
        1 atggtcagcg tgaacgcgcc cctcggggct ccagtggaga gttcttacgg tctgcagttt
       61 ccatggagac cgcctcccac catccctgaa atctcattgt gaccagtatt aagggattaa
      121 ctctgcccag cggccctcgc agggtctggg gtgctgagag gggccagcag gagctccctc
      181 aaggatgaag aggttgtgca ctgtgcggga ccccatagca gcaggaggag gatgtcggac
      241 tggggccagg gcttccccca ggacccacca gacacgtccc catcagaagg caccaacctc
      301 aacgcgccca acagcctggg tgtcagcgcc ctgtgtgcca tctgcgggga ccgggccacg
      361 ggcaaacact acggtgcctc gagctgtgac ggctgcaagg gcttcttccg gaggagcgtg
      421 cggaagaacc acatgtactc ctgcagattt agccggcagt gcgtggtgga caaagacaag
      481 aggaaccagt gccgctactg caggctcaag aaatgcttcc gggctggcat gaagaaggaa
//