LOCUS EU887624 3627 bp mRNA linear HUM 17-OCT-2008 DEFINITION Homo sapiens nuclear factor of activated T-cells c3 isoform IF-deltaXa (NFATC3) mRNA, complete cds, alternatively spliced. ACCESSION EU887624 VERSION EU887624.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3627) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Alternative splicing and expression of human and mouse NFAT genes JOURNAL Genomics 92 (5), 279-291 (2008) PUBMED 18675896 REFERENCE 2 (bases 1 to 3627) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Direct Submission JOURNAL Submitted (11-JUL-2008) Department of Gene Technology, Tallinn University of Technology, Akadeemia Street 15, Tallinn, Harju 12618, Estonia FEATURES Location/Qualifiers source 1..3627 /db_xref="H-InvDB:HIT000558311" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="16" /map="16q22.2" gene 1..3627 /gene="NFATC3" CDS 1837..3627 /gene="NFATC3" /note="transcription factor; alternatively spliced" /codon_start=1 /product="nuclear factor of activated T-cells c3 isoform IF-deltaXa" /protein_id="ACG55644.1" /translation="MFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEI PLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLS LQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQD GRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTY TPVLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQTY ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG PTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPH SVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQPITYGPSHSGSATTASPA ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQHSTQAQSTGQGGLS APSSLICHSLCDPASFPPDGATVSIKPEPEDREPNFATIGLQDITLDDVNEIIGRDMS QISVSQGAGVSRQAPLPSPESLDLGRSDGL" BASE COUNT 962 a 891 c 747 g 1027 t ORIGIN 1 gttttgtgtt tttagtagag acagagtttc accatgttgg ccaggctggt ctggaactcc 61 tgacctcaag ggatcctcct gcctcagcct cccaaagtgg tgggattaca ggcatgggcc 121 actgcaccct gcccaatata tatattttta aatagagatg gaagtctcac tatgttgccc 181 aggctagtct ggaactcctg ggctctcctg ttctggcttc ccaaaatgct gggattacag 241 gtgtgagcca ctgcacatag cccctatatt ttgttaaata agtgaataaa taacacctaa 301 gttttgaatc attgctcact gctctttcgt ggtagaggaa attgacgaga attgtttcag 361 ttctttggct tttattgatg agttccataa attagatctt ggtaatttgg ggctgcagtg 421 gttttacatc tctgaaggtt tgggagtact tgtatcacaa ctaaatttcc atacagtgag 481 aagatttttg aaaaatagtg agatcttgag ccagatgatt gtgcatccat ttacatcttt 541 aatgtagatc cacctccatc tactttaacc acaccacttt gcttaccaca tcatggatta 601 ccgtctcact cttctgtttt gtcaccatcg tttcagctcc aaagtcacaa aaactatgaa 661 ggaacttgtg agattcctga atctaaatat agcccattag gtggtcccaa accctttgag 721 tgcccaagta ttcaaattac atctatctct cctaactgtc atcaagaatt agatgcacat 781 gaagatgacc tacagataaa tgacccagaa cgggaatttt tggaaaggcc ttctagagat 841 catctctatc ttcctcttga gccatcctac cgggagtctt ctcttagtcc tagtcctgcc 901 agcagcatct cttctaggag ttggttctct gatgcatctt cttgtgaatc gctttcacat 961 atttatgatg atgtggactc agagttgaat gaagctgcag cccgatttac ccttggatcc 1021 cctctgactt ctcctggtgg ctctccaggg ggctgccctg gagaagaaac ttggcatcaa 1081 cagtatggac ttggacactc attatcaccc aggcaatctc cttgccactc tcctagatcc 1141 agtgtcactg atgagaattg gctgagcccc aggccagcct caggaccctc atcaaggccc 1201 acatccccct gtgggaaacg gaggcactcc agtgctgaag tttgttatgc tgggtccctt 1261 tcaccccatc actcacctgt tccttcacct ggtcactccc ccaggggaag tgtgacagaa 1321 gatacgtggc tcaatgcttc tgtccatggt gggtcaggcc ttggccctgc agtttttcca 1381 tttcagtact gtgtagagac tgacatccct ctcaaaacaa ggaaaacttc tgaagatcaa 1441 gctgccatac taccaggaaa attagagctg tgttcagatg accaagggag tttatcacca 1501 gcccgggaga cttcaataga tgatggcctt ggatctcagt atcctttaaa gaaagattca 1561 tgtggtgatc agtttctttc agttccttca ccctttacct ggagcaaacc aaagcctggc 1621 cacaccccta tatttcgcac atcttcatta cctccactag actggccttt accagctcat 1681 tttggacaat gtgaactgaa aatagaagtg caacctaaaa ctcatcatcg agcccattat 1741 gaaactgaag gtagccgagg ggcagtaaaa gcatctactg ggggacatcc tgttgtgaag 1801 ctcctgggct ataacgaaaa gccaataaat ctacaaatgt ttattgggac agcagatgat 1861 cgatatttac gacctcatgc attttaccag gtgcatcgaa tcactgggaa gacagtcgct 1921 actgcaagcc aagagataat aattgccagt acaaaagttc tggaaattcc acttcttcct 1981 gaaaataata tgtcagccag tattgattgt gcaggtattt tgaaactccg caattcagat 2041 atagaacttc gaaaaggaga aactgatatt ggcagaaaga atactagagt acgacttgtg 2101 tttcgtgtac acatcccaca gcccagtgga aaagtccttt ctctgcagat agcctctata 2161 cccgttgagt gctcccagcg gtctgctcaa gaacttcctc atattgagaa gtacagtatc 2221 aacagttgtt ctgtaaatgg aggtcatgaa atggttgtga ctggatctaa ttttcttcca 2281 gaatccaaaa tcatttttct tgaaaaagga caagatggac gacctcagtg ggaggtagaa 2341 gggaagataa tcagggaaaa atgtcaaggg gctcacattg tccttgaagt tcctccatat 2401 cataacccag cagttacagc tgcagtgcag gtgcactttt atctttgcaa tggcaagagg 2461 aaaaaaagcc agtctcaacg ttttacttat acaccagttt tgatgaagca agaacacaga 2521 gaagagattg atttgtcttc agttccatct ttgcctgtgc ctcatcctgc tcagacccag 2581 aggccttcct ctgattcagg gtgttcacat gacagtgtac tgtcaggaca gagaagtttg 2641 atttgctcca tcccacaaac atatgcatcc atggtgacct catcccatct gccacagttg 2701 cagtgtagag atgagagtgt tagtaaagaa cagcatatga ttccttctcc aattgtacac 2761 cagccttttc aagtcacacc aacacctcct gtggggtctt cctatcagcc tatgcaaact 2821 aatgttgtgt acaatggacc aacttgtctt cctattaatg ctgcctctag tcaagaattt 2881 gattcagttt tgtttcagca ggatgcaact ctttctggtt tagtgaatct tggctgtcaa 2941 ccactgtcat ccataccatt tcattcttca aattcaggct caacaggaca tctcttagcc 3001 catacacctc attctgtgca taccctgcct catctgcaat caatgggata tcattgttca 3061 aatacaggac aaagatctct ttcttctcca gtggctgacc agattacagg tcagccttcg 3121 tctcagttac aacctattac atatggtcct tcacattcag ggtctgctac aacagcttcc 3181 ccagcagctt ctcatccctt ggctagttca ccgctttctg ggccaccatc tcctcagctt 3241 cagcctatgc cttaccaatc tcctagctca ggaactgcct catcaccgtc tccagccacc 3301 agaatgcatt ctggacagca ctcaactcaa gcacaaagta cgggccaggg gggtctttct 3361 gcaccttcat ccttaatatg tcacagtttg tgtgatccag cgtcatttcc acctgatggg 3421 gcaactgtga gcattaaacc tgaaccagaa gatcgagagc ctaactttgc aaccattggt 3481 ctgcaggaca tcactttaga tgatgtgaac gagataattg ggagagacat gtcccagatt 3541 tctgtttccc aaggagcagg ggtgagcagg caggctcccc tcccgagtcc tgagtccctg 3601 gatttaggaa gatctgatgg gctctaa //