LOCUS EU887613 3588 bp mRNA linear HUM 17-OCT-2008 DEFINITION Homo sapiens nuclear factor of activated T-cells c3 isoform IAS-IX (NFATC3) mRNA, complete cds, alternatively spliced. ACCESSION EU887613 VERSION EU887613.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3588) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Alternative splicing and expression of human and mouse NFAT genes JOURNAL Genomics 92 (5), 279-291 (2008) PUBMED 18675896 REFERENCE 2 (bases 1 to 3588) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Direct Submission JOURNAL Submitted (11-JUL-2008) Department of Gene Technology, Tallinn University of Technology, Akadeemia Street 15, Tallinn, Harju 12618, Estonia FEATURES Location/Qualifiers source 1..3588 /db_xref="H-InvDB:HIT000558300" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="16" /map="16q22.2" gene 1..3588 /gene="NFATC3" CDS 1483..3183 /gene="NFATC3" /note="transcription factor; alternatively spliced" /codon_start=1 /product="nuclear factor of activated T-cells c3 isoform IAS-IX" /protein_id="ACG55633.1" /translation="MFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEI PLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLS LQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQD GRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTY TPVLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQTY ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG PTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPH SVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQPITYGPSHSGSATTASPA ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQHSTQAQSTGQGGLS APSSLICHSLCDPASFPPDGATVSIKPEPEDREPNFATIGLQDITLDDGKFISDMFLK " BASE COUNT 949 a 898 c 758 g 983 t ORIGIN 1 gaccgcgagc tcagagtccg gacttgtcgc gcaatctgtc tccttcggtt ccaccccaac 61 ctagctggac tctcggtccg gtccctgccc tctggagact cagccattaa agttgaggtg 121 gggggatgag gatgtgggcg gcgtccagat cttgagccag atgattgtgc atccatttac 181 atctttaatg tagatccacc tccatctact ttaaccacac cactttgctt accacatcat 241 ggattaccgt ctcactcttc tgttttgtca ccatcgtttc agctccaaag tcacaaaaac 301 tatgaaggaa cttgtgagat tcctgaatct aaatatagcc cattaggtgg tcccaaaccc 361 tttgagtgcc caagtattca aattacatct atctctccta actgtcatca agaattagat 421 gcacatgaag atgacctaca gataaatgac ccagaacggg aatttttgga aaggccttct 481 agagatcatc tctatcttcc tcttgagcca tcctaccggg agtcttctct tagtcctagt 541 cctgccagca gcatctcttc taggagttgg ttctctgatg catcttcttg tgaatcgctt 601 tcacatattt atgatgatgt ggactcagag ttgaatgaag ctgcagcccg atttaccctt 661 ggatcccctc tgacttctcc tggtggctct ccagggggct gccctggaga agaaacttgg 721 catcaacagt atggacttgg acactcatta tcacccaggc aatctccttg ccactctcct 781 agatccagtg tcactgatga gaattggctg agccccaggc cagcctcagg accctcatca 841 aggcccacat ccccctgtgg gaaacggagg cactccagtg ctgaagtttg ttatgctggg 901 tccctttcac cccatcactc acctgttcct tcacctggtc actcccccag gggaagtgtg 961 acagaagata cgtggctcaa tgcttctgtc catggtgggt caggccttgg ccctgcagtt 1021 tttccatttc agtactgtgt agagactgac atccctctca aaacaaggaa aacttctgaa 1081 gatcaagctg ccatactacc aggaaaatta gagctgtgtt cagatgacca agggagttta 1141 tcaccagccc gggagacttc aatagatgat ggccttggat ctcagtatcc tttaaagaaa 1201 gattcatgtg gtgatcagtt tctttcagtt ccttcaccct ttacctggag caaaccaaag 1261 cctggccaca cccctatatt tcgcacatct tcattacctc cactagactg gcctttacca 1321 gctcattttg gacaatgtga actgaaaata gaagtgcaac ctaaaactca tcatcgagcc 1381 cattatgaaa ctgaaggtag ccgaggggca gtaaaagcat ctactggggg acatcctgtt 1441 gtgaagctcc tgggctataa cgaaaagcca ataaatctac aaatgtttat tgggacagca 1501 gatgatcgat atttacgacc tcatgcattt taccaggtgc atcgaatcac tgggaagaca 1561 gtcgctactg caagccaaga gataataatt gccagtacaa aagttctgga aattccactt 1621 cttcctgaaa ataatatgtc agccagtatt gattgtgcag gtattttgaa actccgcaat 1681 tcagatatag aacttcgaaa aggagaaact gatattggca gaaagaatac tagagtacga 1741 cttgtgtttc gtgtacacat cccacagccc agtggaaaag tcctttctct gcagatagcc 1801 tctatacccg ttgagtgctc ccagcggtct gctcaagaac ttcctcatat tgagaagtac 1861 agtatcaaca gttgttctgt aaatggaggt catgaaatgg ttgtgactgg atctaatttt 1921 cttccagaat ccaaaatcat ttttcttgaa aaaggacaag atggacgacc tcagtgggag 1981 gtagaaggga agataatcag ggaaaaatgt caaggggctc acattgtcct tgaagttcct 2041 ccatatcata acccagcagt tacagctgca gtgcaggtgc acttttatct ttgcaatggc 2101 aagaggaaaa aaagccagtc tcaacgtttt acttatacac cagttttgat gaagcaagaa 2161 cacagagaag agattgattt gtcttcagtt ccatctttgc ctgtgcctca tcctgctcag 2221 acccagaggc cttcctctga ttcagggtgt tcacatgaca gtgtactgtc aggacagaga 2281 agtttgattt gctccatccc acaaacatat gcatccatgg tgacctcatc ccatctgcca 2341 cagttgcagt gtagagatga gagtgttagt aaagaacagc atatgattcc ttctccaatt 2401 gtacaccagc cttttcaagt cacaccaaca cctcctgtgg ggtcttccta tcagcctatg 2461 caaactaatg ttgtgtacaa tggaccaact tgtcttccta ttaatgctgc ctctagtcaa 2521 gaatttgatt cagttttgtt tcagcaggat gcaactcttt ctggtttagt gaatcttggc 2581 tgtcaaccac tgtcatccat accatttcat tcttcaaatt caggctcaac aggacatctc 2641 ttagcccata cacctcattc tgtgcatacc ctgcctcatc tgcaatcaat gggatatcat 2701 tgttcaaata caggacaaag atctctttct tctccagtgg ctgaccagat tacaggtcag 2761 ccttcgtctc agttacaacc tattacatat ggtccttcac attcagggtc tgctacaaca 2821 gcttccccag cagcttctca tcccttggct agttcaccgc tttctgggcc accatctcct 2881 cagcttcagc ctatgcctta ccaatctcct agctcaggaa ctgcctcatc accgtctcca 2941 gccaccagaa tgcattctgg acagcactca actcaagcac aaagtacggg ccaggggggt 3001 ctttctgcac cttcatcctt aatatgtcac agtttgtgtg atccagcgtc atttccacct 3061 gatggggcaa ctgtgagcat taaacctgaa ccagaagatc gagagcctaa ctttgcaacc 3121 attggtctgc aggacatcac tttagatgat ggtaagttca tctctgatat gttcttgaag 3181 tagtgaagat tcagggactt tattctccca agtgtcatga aaaagtttct atggattgct 3241 tattggcata tggttgggct tttaaataag ttgttattag aaatatatgt taatatataa 3301 ctttgccagg taccacggct cacgcctgta tcccagcact ttggaaggct gaggcgggtg 3361 gatcacaagg tcaggagttc aagaccagcc tggccaacat ggtgtaacgc tgtctctact 3421 aaaaatacaa aaaattagcc aggcatggtg gtgtgtgact ataatcccag ctactcggga 3481 ggctgagaca ggagaatcac ttgaacccgg gaggtggcag ttgcagggag ctaagatcgc 3541 gccattgcac tccagcctgg gcggcagagc aagactccgt ctcgggaa //