LOCUS EU887610 3870 bp mRNA linear HUM 17-OCT-2008 DEFINITION Homo sapiens nuclear factor of activated T-cells c3 isoform IAL-IX (NFATC3) mRNA, complete cds, alternatively spliced. ACCESSION EU887610 VERSION EU887610.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3870) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Alternative splicing and expression of human and mouse NFAT genes JOURNAL Genomics 92 (5), 279-291 (2008) PUBMED 18675896 REFERENCE 2 (bases 1 to 3870) AUTHORS Vihma,H., Pruunsild,P. and Timmusk,T. TITLE Direct Submission JOURNAL Submitted (10-JUL-2008) Department of Gene Technology, Tallinn University of Technology, Akadeemia Street 15, Tallinn, Harju 12618, Estonia FEATURES Location/Qualifiers source 1..3870 /db_xref="H-InvDB:HIT000558297" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="16" /map="16q22.2" gene 1..3870 /gene="NFATC3" CDS 1765..3465 /gene="NFATC3" /note="transcription factor; alternatively spliced" /codon_start=1 /product="nuclear factor of activated T-cells c3 isoform IAL-IX" /protein_id="ACG55630.1" /translation="MFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEI PLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLS LQIASIPVECSQRSAQELPHIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFLEKGQD GRPQWEVEGKIIREKCQGAHIVLEVPPYHNPAVTAAVQVHFYLCNGKRKKSQSQRFTY TPVLMKQEHREEIDLSSVPSLPVPHPAQTQRPSSDSGCSHDSVLSGQRSLICSIPQTY ASMVTSSHLPQLQCRDESVSKEQHMIPSPIVHQPFQVTPTPPVGSSYQPMQTNVVYNG PTCLPINAASSQEFDSVLFQQDATLSGLVNLGCQPLSSIPFHSSNSGSTGHLLAHTPH SVHTLPHLQSMGYHCSNTGQRSLSSPVADQITGQPSSQLQPITYGPSHSGSATTASPA ASHPLASSPLSGPPSPQLQPMPYQSPSSGTASSPSPATRMHSGQHSTQAQSTGQGGLS APSSLICHSLCDPASFPPDGATVSIKPEPEDREPNFATIGLQDITLDDGKFISDMFLK " BASE COUNT 1011 a 989 c 835 g 1035 t ORIGIN 1 ccgccccgca gagggtgggc ctgcggcgac cgcgagctca gagtccggac ttgtcgcgca 61 atctgtctcc ttcggttcca ccccaaccta gctggactct cggtccggtc cctgccctct 121 ggagactcag ccattaaagt tgaggtgggg ggatgaggat gtgggcggcg tccaggtaac 181 tctgaggggc cctgatgcct tccctagagc cagccatcag gagtaacacg atgcgccccc 241 acatcaccga acccagaacc tcagtgcttc agcacccctt cctcgacatg agctccgccc 301 aatgaggaga agggtcttct gcattggccg gtggtggtcc cctatccaat tagagaggct 361 aacggccttc tctcgtctgg tttagaagga atcgccgggg gaatacaggc caaactacaa 421 ttcccgagag atcttgagcc agatgattgt gcatccattt acatctttaa tgtagatcca 481 cctccatcta ctttaaccac accactttgc ttaccacatc atggattacc gtctcactct 541 tctgttttgt caccatcgtt tcagctccaa agtcacaaaa actatgaagg aacttgtgag 601 attcctgaat ctaaatatag cccattaggt ggtcccaaac cctttgagtg cccaagtatt 661 caaattacat ctatctctcc taactgtcat caagaattag atgcacatga agatgaccta 721 cagataaatg acccagaacg ggaatttttg gaaaggcctt ctagagatca tctctatctt 781 cctcttgagc catcctaccg ggagtcttct cttagtccta gtcctgccag cagcatctct 841 tctaggagtt ggttctctga tgcatcttct tgtgaatcgc tttcacatat ttatgatgat 901 gtggactcag agttgaatga agctgcagcc cgatttaccc ttggatcccc tctgacttct 961 cctggtggct ctccaggggg ctgccctgga gaagaaactt ggcatcaaca gtatggactt 1021 ggacactcat tatcacccag gcaatctcct tgccactctc ctagatccag tgtcactgat 1081 gagaattggc tgagccccag gccagcctca ggaccctcat caaggcccac atccccctgt 1141 gggaaacgga ggcactccag tgctgaagtt tgttatgctg ggtccctttc accccatcac 1201 tcacctgttc cttcacctgg tcactccccc aggggaagtg tgacagaaga tacgtggctc 1261 aatgcttctg tccatggtgg gtcaggcctt ggccctgcag tttttccatt tcagtactgt 1321 gtagagactg acatccctct caaaacaagg aaaacttctg aagatcaagc tgccatacta 1381 ccaggaaaat tagagctgtg ttcagatgac caagggagtt tatcaccagc ccgggagact 1441 tcaatagatg atggccttgg atctcagtat cctttaaaga aagattcatg tggtgatcag 1501 tttctttcag ttccttcacc ctttacctgg agcaaaccaa agcctggcca cacccctata 1561 tttcgcacat cttcattacc tccactagac tggcctttac cagctcattt tggacaatgt 1621 gaactgaaaa tagaagtgca acctaaaact catcatcgag cccattatga aactgaaggt 1681 agccgagggg cagtaaaagc atctactggg ggacatcctg ttgtgaagct cctgggctat 1741 aacgaaaagc caataaatct acaaatgttt attgggacag cagatgatcg atatttacga 1801 cctcatgcat tttaccaggt gcatcgaatc actgggaaga cagtcgctac tgcaagccaa 1861 gagataataa ttgccagtac aaaagttctg gaaattccac ttcttcctga aaataatatg 1921 tcagccagta ttgattgtgc aggtattttg aaactccgca attcagatat agaacttcga 1981 aaaggagaaa ctgatattgg cagaaagaat actagagtac gacttgtgtt tcgtgtacac 2041 atcccacagc ccagtggaaa agtcctttct ctgcagatag cctctatacc cgttgagtgc 2101 tcccagcggt ctgctcaaga acttcctcat attgagaagt acagtatcaa cagttgttct 2161 gtaaatggag gtcatgaaat ggttgtgact ggatctaatt ttcttccaga atccaaaatc 2221 atttttcttg aaaaaggaca agatggacga cctcagtggg aggtagaagg gaagataatc 2281 agggaaaaat gtcaaggggc tcacattgtc cttgaagttc ctccatatca taacccagca 2341 gttacagctg cagtgcaggt gcacttttat ctttgcaatg gcaagaggaa aaaaagccag 2401 tctcaacgtt ttacttatac accagttttg atgaagcaag aacacagaga agagattgat 2461 ttgtcttcag ttccatcttt gcctgtgcct catcctgctc agacccagag gccttcctct 2521 gattcagggt gttcacatga cagtgtactg tcaggacaga gaagtttgat ttgctccatc 2581 ccacaaacat atgcatccat ggtgacctca tcccatctgc cacagttgca gtgtagagat 2641 gagagtgtta gtaaagaaca gcatatgatt ccttctccaa ttgtacacca gccttttcaa 2701 gtcacaccaa cacctcctgt ggggtcttcc tatcagccta tgcaaactaa tgttgtgtac 2761 aatggaccaa cttgtcttcc tattaatgct gcctctagtc aagaatttga ttcagttttg 2821 tttcagcagg atgcaactct ttctggttta gtgaatcttg gctgtcaacc actgtcatcc 2881 ataccatttc attcttcaaa ttcaggctca acaggacatc tcttagccca tacacctcat 2941 tctgtgcata ccctgcctca tctgcaatca atgggatatc attgttcaaa tacaggacaa 3001 agatctcttt cttctccagt ggctgaccag attacaggtc agccttcgtc tcagttacaa 3061 cctattacat atggtccttc acattcaggg tctgctacaa cagcttcccc agcagcttct 3121 catcccttgg ctagttcacc gctttctggg ccaccatctc ctcagcttca gcctatgcct 3181 taccaatctc ctagctcagg aactgcctca tcaccgtctc cagccaccag aatgcattct 3241 ggacagcact caactcaagc acaaagtacg ggccaggggg gtctttctgc accttcatcc 3301 ttaatatgtc acagtttgtg tgatccagcg tcatttccac ctgatggggc aactgtgagc 3361 attaaacctg aaccagaaga tcgagagcct aactttgcaa ccattggtct gcaggacatc 3421 actttagatg atggtaagtt catctctgat atgttcttga agtagtgaag attcagggac 3481 tttattctcc caagtgtcat gaaaaagttt ctatggattg cttattggca tatggttggg 3541 cttttaaata agttgttatt agaaatatat gttaatatat aactttgcca ggtaccacgg 3601 ctcacgcctg tatcccagca ctttggaagg ctgaggcggg tggatcacaa ggtcaggagt 3661 tcaagaccag cctggccaac atggtgtaac gctgtctcta ctaaaaatac aaaaaattag 3721 ccaggcatgg tggtgtgtga ctataatccc agctactcgg gaggctgaga caggagaatc 3781 acttgaaccc gggaggtggc agttgcaggg agctaagatc gcgccattgc actccagcct 3841 gggcggcaga gcaagactcc gtctcgggaa //